Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0177 ATGAGAAAGAAAACCTATTCCGACTTTTCTCTCTTCCTCATTCTACTTCTTGCTGCAAACTCTCTCCGTGCCTCTGCAATCTCGCACAATGGACCTCTCTCAGACTCAGAAGTATCCTACATCAAGCACCGTCAGCTTCTGTATTACAAGGATGAGTTCGGTGACAGAGGAGAAAAAGTAACCGTAGATCCCTCTTTCGTCTTCGAGAACCAACGTTTGAAAAATGCCTACATAGCGTTACAAGCCTGGAAGGAAGCCATTCTCTCCGATCCGAAGAATCTCACGCAGGACTGGGTCGGCCCCAATGTCTGCAACTACTCCTTCGTTTTCTGCGCTCCGGCGCTGGATAACCGTAAGATCCGCACCGTCGCTGGCATCGACCTCAACCATGGCGACATTGCCGGATACCTGCCGGAGGAGCTTGGTTTACTCACCGACCTTGCGCTTCTCCACATCAACACCAACCGCTTCTGCGGCACTGTGCCGCACAAGTTTGACAAGCTGAAAATCCTCTTCGAGTTAGATCTCAGCAACAACCGCTTCGCCGGGAAGTTCCCTGACGTGGTGCTGCGTTTGCCGCAGCTGAAGTTTCTAGATCTGAGGTTCAACGAGTTCGAAGGCACGGTTCCGAAGGAGCTCTTCGACAAGGACCTGGACGCCATTTTCATCAATGACAACCGCTTCGTCTTCGACTTGCCGGATAATTTTGGAAACTCGCCGGTGTCGGTGATTGTGCTGGCGAACAACCGGTTCCATGGATCGCTCCCCCGGCCAATGTAA 780 0.5192 MRKKTYSDFSLFLILLLAANSLRASAISHNGPLSDSEVSYIKHRQLLYYKDEFGDRGEKVTVDPSFVFENQRLKNAYIALQAWKEAILSDPKNLTQDWVGPNVCNYSFVFCAPALDNRKIRTVAGIDLNHGDIAGYLPEELGLLTDLALLHINTNRFCGTVPHKFDKLKILFELDLSNNRFAGKFPDVVLRLPQLKFLDLRFNEFEGTVPKELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGSLPRPM 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0177 259 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 9 257 - -
Aed7g0177 259 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 257 - -
Aed7g0177 259 Pfam Leucine rich repeat 147 204 IPR001611 GO:0005515
Aed7g0177 259 Gene3D Ribonuclease Inhibitor 73 259 IPR032675 -
Aed7g0177 259 SUPERFAMILY L domain-like 77 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0177 Aed-Chr7 1233068 1234206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0177 26 256 Leucine-rich Repeat extension Gene Families AT3G24480 80.087 2.15e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0177 - - gmx:106799218 451.825