Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0174 ATGGCGAGTCGGTTGAAGGAAGATGAGAAAAACGAGCGCGTGATTCGAGGTCTTCTCAAGCTTCAACATAATCGCAGATGCATTAACTGCAACAGTCTGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACGAACTGCAGTGGAATACACCGGGAATTCACTCATCGAGTAAAATCAGTTTCAATGGCTAAGTTTACTTCACAAGAAGTTAGTGCGCTTCAAGAAGGAGGGAATCAGCGTGCAAAAGAAATTTATTTTAAAGAATGGGATGCACAACGCCAATCTTTCCCTGATAGCAGTAATGTTGACAAGCTCCGAGACTTTATTAAGCATGTTTATGTGGATAGAAGATTCACTGGAGACAAGACCAATGACAAACCACCACGAGCCAAGCCTGGTGACAAAGATGAATTTTATCAAGGAGGATCTAGAAGCCCTCCCTATGAGGACACATCTGAACGCCGTTATAGTGACAGATCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCCAGAAAGTAGGCAATATGGTGATTATAAGAAAAGTCCTGGTCGTCCTCCAATAATTAATGATTGGCGTCGTGAAGATCGTAGAATATCAGATGGAGATTATAAGTTGGAAAGCCAATCTCCTGAGCGAGCCAAAGATGTGGATTCTTCAAGCCCACCTGTGGTTCGACCTGTTAGAGATATTTTGGGAGAAAATGTAGTGCCTCTTCGGATAAGTGAACCACCTAAACCAAACAGTGGAAGACCTGCTGATAGCTCAGCACCAACACAGAGAACAGCATCTTCCAGTAGCTTGGCTTCTGGCAATGAAAACCCAGTAGATGTTAAGCTTGAGACTACCAAGAGCCTTATTGACTTTGATGCTGATCCTGAACCTCCAGTCGCTCCATCAATTCCTCAAGCCCAACAAACTACTGTGCCTCAACCTGTTGTGCAGCCAGCAAACTCCAGTAATGACAATTGGGCCTCTTTTGATGTTGCTCCTGCAACAAAAGCAACTCCAAGCTCCTCAAATTTAAATCCACTTGAATCTATGTTATCCCAATTGTCTGTGCCAGCATCTTTACCTGCTCAAGTGTCTGGAGTCCAAGGACCTATTCCAGCATCATCTCTTACTTCTACTTCTGGAGCTGCAAGTGTTAGCGGTTTCTCAGCTTTCCCACCCAGCAATGCTTCAGTACCATCTCCTGGATTGACGTCAGTTTTGCCTCTTAATAATGCAGGACAGTGGGCTACTTTGCAGCAGCAGCAACAATTGTTCCCCGCTGCTGTTAGTCATCATACTACACAACAATTTACACCACCATTAGGTGGAGCAGCAAATAATCAGTCATGGAATGTACCTTCTGCACCCACAGTGCAAGGGCATCCAAGAACACCAATGCCACATACATACCCTTATGCCTCAAAGCTTCCCAATGAGGCTATATCCAGTGTTGTTTCACAACCTCATGCTGCAGAAGTTAAAGCAAGTGGAAGGAAAGAACTTCCCGAGGATCTGTTCACTGTAAAATATTCTTCCTTCCCTGCTCCAGTCCTAGGTTGGCAAATGGGTGTTCCCCATGGCATGGGTATCTCAATGCAATACAATAATATGGTGCCTGTGTCAAGTTTTCCACATCCATCAAAGTCAACAAATCCGTTTGATGTCAGCAGTGAACCAACAGCAAATCAAGCCCCAACTTTTCCTTCCATGTCATCCTTGCAAGGTGCCCTGCATGGTGTACCACCTGGTGGCACAGTGCACCCTTCAAGCATGGGTAATCCAACACATGGCTGGACTTCTCCCCCATCATCATTTCTGCCTGCACAAGCACAAATGCATGCAAACACATTGGGACCAAGGGCATATATGGGGCAACATATGCCGACTAACATGCCAATGCCAAGGCAAGATGTTGGGAATTTTGGTAACCAAGGAGCTGTTTTCGGCTTGTCAAATCCAGATCAGCAGCTGACCGGCAGGTTATCAAACACTCCCACCTCTAACTCATTCCCTACGGGAGGGAACCCATTCGGATAA 2043 0.4542 MASRLKEDEKNERVIRGLLKLQHNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNQRAKEIYFKEWDAQRQSFPDSSNVDKLRDFIKHVYVDRRFTGDKTNDKPPRAKPGDKDEFYQGGSRSPPYEDTSERRYSDRSSPGGRSPGYDPESRQYGDYKKSPGRPPIINDWRREDRRISDGDYKLESQSPERAKDVDSSSPPVVRPVRDILGENVVPLRISEPPKPNSGRPADSSAPTQRTASSSSLASGNENPVDVKLETTKSLIDFDADPEPPVAPSIPQAQQTTVPQPVVQPANSSNDNWASFDVAPATKATPSSSNLNPLESMLSQLSVPASLPAQVSGVQGPIPASSLTSTSGAASVSGFSAFPPSNASVPSPGLTSVLPLNNAGQWATLQQQQQLFPAAVSHHTTQQFTPPLGGAANNQSWNVPSAPTVQGHPRTPMPHTYPYASKLPNEAISSVVSQPHAAEVKASGRKELPEDLFTVKYSSFPAPVLGWQMGVPHGMGISMQYNNMVPVSSFPHPSKSTNPFDVSSEPTANQAPTFPSMSSLQGALHGVPPGGTVHPSSMGNPTHGWTSPPSSFLPAQAQMHANTLGPRAYMGQHMPTNMPMPRQDVGNFGNQGAVFGLSNPDQQLTGRLSNTPTSNSFPTGGNPFG 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0174 680 MobiDBLite consensus disorder prediction 653 680 - -
Aed7g0174 680 MobiDBLite consensus disorder prediction 590 608 - -
Aed7g0174 680 SUPERFAMILY ArfGap/RecO-like zinc finger 11 124 IPR037278 -
Aed7g0174 680 MobiDBLite consensus disorder prediction 191 218 - -
Aed7g0174 680 CDD ArfGap_AGFG 12 122 - -
Aed7g0174 680 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Aed7g0174 680 MobiDBLite consensus disorder prediction 305 326 - -
Aed7g0174 680 MobiDBLite consensus disorder prediction 123 326 - -
Aed7g0174 680 MobiDBLite consensus disorder prediction 256 283 - -
Aed7g0174 680 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Aed7g0174 680 MobiDBLite consensus disorder prediction 123 142 - -
Aed7g0174 680 PANTHER ARFGAP/RECO-RELATED 1 680 IPR044820 GO:0005096
Aed7g0174 680 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Aed7g0174 680 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Aed7g0174 680 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Aed7g0174 680 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Aed7g0174 680 MobiDBLite consensus disorder prediction 547 575 - -
Aed7g0174 680 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Aed7g0174 680 MobiDBLite consensus disorder prediction 547 608 - -
Aed7g0174 680 PANTHER ARF GTPASE ACTIVATOR 1 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0174 Aed-Chr7 1211392 1219326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0174 12 122 C2H2 Transcription Factor Family AT4G21160 30.645 6.66e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0174 - - gmx:102669541 1221.07