Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0171 ATGCATGAGACTCATTTTTCTCTGCTTGTTAGAGAAGGACCATCCTGTTACAGTGTTGGGCACTTACAAATGGATTTAGACGACAAGTTCCTTGTTAAAGGAGGGTTCTGGGTTCTAGTGCTGTTTATACTCTTGAGCCTATGTTTGATGTTGAAATGTGAGGCCTGCAAGTGTGGAGCTAAAGCAGTTCCTGGTGTTCAAAGCCTTTCATCCAGTGCACAAAGTACTCCAGAAAAAAATGGGCATTTGGATGATGCTTCAAGAAGTTCAGAACTTCTTCAGGAGTTCATAAAACCTGGTTCTAAGAAGGAACTTTTACGAACTTGCTTTGATAAGGACAAAAAGAACATTTCTTCAAAAAGCAGGATGGCTGAAACTAAGTCAACCAATAAGATTTTCAAGAAACAGGACTCAAAAAAAGTTTCTGGTCTCAGCAATCAGCCTTCTAGGAAGCAACATCGCAAAGGAGAAAACCCAGTGCGGTTTGTACCAGTTCCTGACCCACCTAGTGATTTTGGGCATTCAAACTCCTGGATCTGTAAGAATTCTGCCTGCCGAGCTGTTCTCTCTAAAGATGACACTTTTTGTAGAAGGTGCTCTTGCTGTATTTGCCACCTTTTTGATGACAACAAGGATCCTAGTCTTTGGTTGGTATGCACATGTGAATCTTCTCAAGGGGACTCCTGTGGGTTGTCTTGCCATATTGAGTGTGCTCTTCAACATGAAAAAGTAGGAGTTGTTGATCATGGACAACTGATGCAACTAGATGGTGGTTATTGTTGTGCATCCTGCGGTAAAGTTACTGGGATACTTGGATGTTGGAAGAAGCAGCTAAGTATAGCTAAAGATGCCCGGCGTGTAGATGTACTATGTTACAGGATATACTTGAGCTACAGGCTTTTGGATGGGACTTCTAGATTTAAAGAATTGCATGAAATGGTAAAAGAGGCAAAGTCTAAACTGGAAACTGAAGTTGGTCCAGTTAGTGGGGTTTCTGCCAAGATGGCACGTGGCATTGTCAGCAGACTCCCTATTGCCAGTGATGTACAAAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGAGTGGTTGACCACTGTTCCTAATGTAAATCCAGAATCGAGAGAGGGTTCACTTCCTGCTGCATGCAAGGTTGTGTTTGAAGAGGTAACAGCTTCCTCGGTCAAAATCATTTTAATTGAAATATCAACTGCATCTTCTGTGGATATCAAGGGATACAAGCTCTGGTATTACAAGAGTAGAGACGAGTCACACACTAAAGATCCCGTTTGTGTGTTTCCCAAAGCTCAGAGAAGGATTCTGATATCCAACCTTCAGCCTTGTACAGAATATATATTTCGGATCGTATCTTTTACAGATATGGGTGACCTGGGTCATTCTGAGGCTAAGTGTTTCACCAAGAGCATTGAGATATTGGAAAAGAATTCATCTTTGTCAGTTGCCATGAATAAAAAAAAGGAGAACCTTCAAACTGAATGCAATTCTTCTGGCTCCAAAATGGAGCCCAATCCTACGATGGCAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAATTTTGCATCTTACTTGGGCTCAAGAACAAGGCTCCTTGGAGGGGTTTTGCTGCGCTGACAAGAGAAATTGCTGCGGGCAAAGTGAAACAATCAAGCCTAGCAATCCACAAGAGCAGTTGCCTTCAGTTTCACGTGATCTTGATCTAAATGTTGTTTCAGTGCCTGATTTAAATGAAGAGCTTACACCTCCGTTCGAGTCTTCTAGGGATGAAGATAATGGCTGCACTTTGCAGCAGGCTGTTGAGGCAGATGATGATGCCGCATCTCATGATTTAGAAAAAAATCTAGCAAGATCACACGGTAGTGGCGGTTCCCAAACTTGGAACCATGGTCCAACCGGAGAAGTTCCAGCAGTTGACTCTCGTGGAGACGCAAGTAGGAAAAGGGTGGCAAGCACAAATGAAGAGACACATGACTGTGACAGCACTTTGATAAATGATTCTCCTTTACGCACACCTGATGTTCCATTCTCCTTAGATGAGAACTTTGAGTATTGTGTGAAAGTGATTCGTTGGCTAGAATGCCAGGGTCATATCAAGCAGGAATTTAGGTTGAAATTGCTGACATGGTTTAGTTTGAGGTCGACGGAGCAAGAACGTAGGGTGGTAAATACTTTCATTCAAACTCTGATTGATGATCCAAGTAGTTTGGCAGGGCAACTAGTTGACTCATTTTCTGATATTATATCCAACAAGAGGCCAAGAAATGGGTTCTCCAATAAGGCTGTGGAATCATGTCACATTACATGA 2325 0.4241 MHETHFSLLVREGPSCYSVGHLQMDLDDKFLVKGGFWVLVLFILLSLCLMLKCEACKCGAKAVPGVQSLSSSAQSTPEKNGHLDDASRSSELLQEFIKPGSKKELLRTCFDKDKKNISSKSRMAETKSTNKIFKKQDSKKVSGLSNQPSRKQHRKGENPVRFVPVPDPPSDFGHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTCESSQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLSIAKDARRVDVLCYRIYLSYRLLDGTSRFKELHEMVKEAKSKLETEVGPVSGVSAKMARGIVSRLPIASDVQKLCSLAIEKADEWLTTVPNVNPESREGSLPAACKVVFEEVTASSVKIILIEISTASSVDIKGYKLWYYKSRDESHTKDPVCVFPKAQRRILISNLQPCTEYIFRIVSFTDMGDLGHSEAKCFTKSIEILEKNSSLSVAMNKKKENLQTECNSSGSKMEPNPTMADSGFKVRDLGKILHLTWAQEQGSLEGFCCADKRNCCGQSETIKPSNPQEQLPSVSRDLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDLEKNLARSHGSGGSQTWNHGPTGEVPAVDSRGDASRKRVASTNEETHDCDSTLINDSPLRTPDVPFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFSNKAVESCHIT 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0171 774 Pfam PHD - plant homeodomain finger protein 180 298 IPR032881 -
Aed7g0171 774 SUPERFAMILY Fibronectin type III 385 468 IPR036116 GO:0005515
Aed7g0171 774 ProSiteProfiles Fibronectin type-III domain profile. 381 478 IPR003961 GO:0005515
Aed7g0171 774 CDD FN3 384 463 IPR003961 GO:0005515
Aed7g0171 774 Gene3D Immunoglobulins 366 476 IPR013783 -
Aed7g0171 774 PANTHER VIN3-LIKE PROTEIN 2-RELATED 107 767 IPR044514 GO:0010048|GO:0040029
Aed7g0171 774 PANTHER VIN3-LIKE PROTEIN 1 107 767 - -
Aed7g0171 774 MobiDBLite consensus disorder prediction 646 667 - -
Aed7g0171 774 MobiDBLite consensus disorder prediction 621 672 - -
Aed7g0171 774 MobiDBLite consensus disorder prediction 135 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0171 Aed-Chr7 1190067 1198079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0171 176 762 PHD Gene Family AT3G24440 49.500 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0171 - - gsj:114418583 1370.91