Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0162 ATGGAATCAATAGGGAACTCTTCTGAATCCCCAAACCCTAACTCTTCTTCTTCTTCTTCTGTTGATTTTAACACGGAGCAGCTTCCTCCCAGCCACACCAGCCATACTTCCGAGGAACGCGAGGACATTGATGATGAAGATGACATGTATGATATTCAAGGAACACCTAGAGAGTGGGTTACAAGAGATGAAGTGCGCCGCTTCATAGCAAGGAAATTCAATAACTTCTTACTCACATATGTTAATCCAAAAAGAGAACATCGGGGCAAGGAATATGTGTGGCTGATAAATGATATGGTGTCAGCTAGTAAGTGCAGTTTGGAGATAGATTACATACAGTTTATCCATGTTCATCCCTGCATTGCTATATGGCTGGTTGATGCGCCTCAGTCTGTCTTAGAAGTGATGGAAGATGTTACCAAGAGTGTTGTCTTTGAATTACATCCAAATTATAGAAACGTACACCAAAAGATTTATGTACGAGTAGCCAACTTCTCACTTTATGACCAGATTCGAGATTTAAGGGAGATAAACTTGAATACAATGATCCGGATTGGAGGAGTAGTAACCAGACGTTCTGGAGTTTCCCCCCAGTTGCAGCAGGTGAAGTATGACTGTAGCACATGTGGAGCAACTTTGGGTCCTTTTTTCCAGAATTCCTATTCAGATTCAGAGGTGAAAGTGGGATCATGTCCCGAGTGTCAAGCAAAAGGACCATTCACTGTCAGTGCTGAACAGACAATTTATAGGAATTTTCAGAAGCTTACCCTCCAAGAGAGCCCAGGAATAGTTCCTGCAGGTCGACTTCCAAGATACACGGAAGTGATACTATTGAATGATCTGATTGACTGTGCTCGCCCTGGAGAAGAAATTGAGGTCACAGGTGTTTATACCAATAATTTTGCCACCGTTGTTGAAGCAAATTATGTTACGAAAAAGCAAGACCTTTTCTCTGCCTACGAACTTACGCAGGAAGACATGGAAGAGATTGAAAATTTGGCGAAAGACCCTCGAATCGGAGAAAGGATTGTCAAGTCTATTGCTCCATCAATCTATGGTCACGATGACATAAAAACTGCAATAGCTTTAGCTATGTTTGGAGGTCAAGAGAAAAATGTTGAAGGAAAGCATCGCATGCGAGGAGACATAAATGTTCTTCTCCTCGGTGATCCAGGAACAGCGAAATCTCAGTTTCTTAAATACGTTGAAAAAACTGGGCAGAGAGCTGTATACACCACTGGTAAAGGGGCTTCTGCAGTGGGTCTCACAGCTGCGGTTCACAAGGATCCCCTCACAAAGGAATGGATTCTTGAAGGAGGAGCACTTGTTCTAGCTGACAAAGGAATTTGTCTTATTGACGAGTTTGACAAGATAAAAGACCAGGATAGGGTGAGTATCCATGAAGCCATGGAGCAGCAGAGTATAAGCATATCAAAAGCTGGAATTGTTACATCTCTTCAGGCACGCTTGTTCTGTTATTGCTGCCGCAAATCTCGTTGGAGGAAGGTAAGCAAATATGATTCCTCTAAAACATTTTCTCAAAATGTTGAATTGACAGATCCGATTATTTCCTGTTTTGACATCCTCTGTGTTGTGAAGGACGTTGTTGATCCTATCATCGATGAAATGCTAGCAATGTTTGTCGTTGATAGTTACATCAACTCACAACCCAAGAGTGCTAATCAAGATGACAAGTCCTTTAGTGAGTCCCAAGATGTGAATACTTCTGCCATGCCAGCTGATCCAGAGATACTTCCTCAAGATCTCTTGAGGAAGTACATTACATATGCCAAGTTGAATATTTTTCCCAAGTTATTGGATGTCGATAAGTACGATGAAAAAATGAAAAACTTCTATGCCGATCTGCACAGGGAATCTTCACAAGGACAATGTGTCCCTATTGCCGTAAGGCACATTGAATCAGTGATAAGGATGTCTGAAGCTCATGCGAGAATGCATCTGAGACAAGTTGTTAGAGAAGACGATGTAGACATGGCAATTCGTGTTCTACTTGAATCATTCATTTCAACACAAAAATTTGGGGTGCAGAAAGCTCTTCCAAAGAGCTTTATAAAGTACATGACTTTCAAGAAGGACTATAATGATGTTCTCCTTTTCATTCTCCTCAAGCTAGCACAGAATGCTTTGCATTTCGAAAAAGTTGTCAACGGATCTGTTGCAGGTCTAACTTATGTAGATGTCAGAGTAGATGATCTTTATGAAAAGGCTCAAGAACATCACATTTATGATCTGACGACATTTTTCAATAGCAGTCAATTTTCAAGTGCTAATTTTATATTGGATAAAGAACGGAGAGTGATCAGACATCACATTGCCTGA 2340 0.4103 MESIGNSSESPNPNSSSSSSVDFNTEQLPPSHTSHTSEEREDIDDEDDMYDIQGTPREWVTRDEVRRFIARKFNNFLLTYVNPKREHRGKEYVWLINDMVSASKCSLEIDYIQFIHVHPCIAIWLVDAPQSVLEVMEDVTKSVVFELHPNYRNVHQKIYVRVANFSLYDQIRDLREINLNTMIRIGGVVTRRSGVSPQLQQVKYDCSTCGATLGPFFQNSYSDSEVKVGSCPECQAKGPFTVSAEQTIYRNFQKLTLQESPGIVPAGRLPRYTEVILLNDLIDCARPGEEIEVTGVYTNNFATVVEANYVTKKQDLFSAYELTQEDMEEIENLAKDPRIGERIVKSIAPSIYGHDDIKTAIALAMFGGQEKNVEGKHRMRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPLTKEWILEGGALVLADKGICLIDEFDKIKDQDRVSIHEAMEQQSISISKAGIVTSLQARLFCYCCRKSRWRKVSKYDSSKTFSQNVELTDPIISCFDILCVVKDVVDPIIDEMLAMFVVDSYINSQPKSANQDDKSFSESQDVNTSAMPADPEILPQDLLRKYITYAKLNIFPKLLDVDKYDEKMKNFYADLHRESSQGQCVPIAVRHIESVIRMSEAHARMHLRQVVREDDVDMAIRVLLESFISTQKFGVQKALPKSFIKYMTFKKDYNDVLLFILLKLAQNALHFEKVVNGSVAGLTYVDVRVDDLYEKAQEHHIYDLTTFFNSSQFSSANFILDKERRVIRHHIA 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0162 779 PRINTS Mini-chromosome maintenance (MCM) protein family signature 380 395 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed7g0162 779 PRINTS Mini-chromosome maintenance (MCM) protein family signature 440 454 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed7g0162 779 PRINTS Mini-chromosome maintenance (MCM) protein family signature 522 530 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed7g0162 779 PRINTS Mini-chromosome maintenance (MCM) protein family signature 468 481 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed7g0162 779 Pfam MCM N-terminal domain 71 163 IPR027925 -
Aed7g0162 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 675 IPR027417 -
Aed7g0162 779 ProSiteProfiles MCM family domain profile. 339 548 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed7g0162 779 Gene3D - 171 298 IPR012340 -
Aed7g0162 779 Gene3D - 63 166 - -
Aed7g0162 779 Gene3D - 198 250 - -
Aed7g0162 779 ProSitePatterns MCM family signature. 448 456 IPR018525 GO:0003677|GO:0005524|GO:0006260
Aed7g0162 779 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 240 254 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Aed7g0162 779 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 180 197 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Aed7g0162 779 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 203 215 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Aed7g0162 779 MobiDBLite consensus disorder prediction 1 55 - -
Aed7g0162 779 Pfam MCM P-loop domain 326 552 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed7g0162 779 MobiDBLite consensus disorder prediction 558 577 - -
Aed7g0162 779 Pfam MCM OB domain 170 299 IPR033762 -
Aed7g0162 779 MobiDBLite consensus disorder prediction 1 32 - -
Aed7g0162 779 Pfam MCM AAA-lid domain 588 674 IPR041562 -
Aed7g0162 779 MobiDBLite consensus disorder prediction 558 579 - -
Aed7g0162 779 SMART mcm 167 675 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aed7g0162 779 Gene3D - 319 697 IPR027417 -
Aed7g0162 779 PANTHER DNA HELICASE 31 769 - -
Aed7g0162 779 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 31 769 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aed7g0162 779 SUPERFAMILY Nucleic acid-binding proteins 73 305 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0162 Aed-Chr7 1126154 1130100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0162 49 775 Core DNA Replication Machinery Family AT1G44900 71.159 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0162 K02540 - gmx:100799441 1206.82