Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0150 ATGGCAGCTGCTCTCTCCAACGGCAACGACCACGAAGCTACCTTTTTCAAGATTCCCACCATCAACTTCACCAAGCTCTTTATCAATGGCCAATTTCTTGATTCCCTTTCAGGGAAGGAGTTTGAAACAAGAGATCCTAGAACTGGGGAAGTGATTACGAGAATCGCAGAGGGAAGAAAAGAAGACATTGATGTTGCTGTGAAAGCGGCACGTGTTGCTTTCGACTACGGTCCATGGCCCCGTATGCCCGGCGCTGAAAGAGCAAAAATAATGATGAAATGGGCAGACTTAATTGATGAGAACATAGAAGAAATAGCAGCATTGGATGCCATTGATGCAGGGAAGTTGTACCATTGGTGCAAGGCTGTTGACATTCCTGCAGCAGCAAGTACTATACGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTATTAAAACCATCAAGGGAGTTTCATGCATATACTTTGCTGGAACCAATTGGTGTTGTGGGACACATTATTCCTTGGAACTTCCCTAGCACCATGTTTGTTGCCAAGGTTAGTCCTTCCTTGGCTGCTGGTTGCACTATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCTGCCTTGTTTTATGCTCAACTTGCTAAGCTGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTACCTGGTTTTGGCCCAACTGCTGGTGCTGCAATATGCTCACACATGGACATTGATAAGGTGAGTTTCACCGGTTCAACAGAAGTGGGGCGTGAAGTAATGCGTGCTGCAGCTAATAGTAATTTAAAACCAGTTTCACTTGAACTAGGAGGCAAGTCACCCCTCATAGTTTTTGATGATGCTGATGTAAATAAAGCTGCTGAACTTGCTCTCTTGGGCATCCTATTTAATAAGGGAGAAATTTGTGTTGCGGGCTCCCGTGTGTTGGTTCAGGAAGGAATCTATGATGAGTTTGAGAAGAAATTGGTGGAGAAAGCAAAATCTTGGGTGGTTGGTGATCCTTTTGATCCTAAATCTCAACAAGGGCCTCAGGTTGATAAGAAGCAATTTGAAAAGATTATTTCCTATATCGAGCTTGGAAAGAAAGAAGGGGCAACCCTTTTGACAGGGGGCAAAAGAGTGGGCAACAAGGGTTACTACATTGAGCCTACAATTTTCTCCAATGTTAAGGAGGACATGCTTATAGTACAAGATGAAATATTTGGCCCTGTGATGGCTTTGATGAAGTTTAAGACCATTGAGGAAGCAATTAAGATTGGCAACAATACCAGATATGGCTTAGCAGCAGGAATTGTGACAAAGAGTTTGGACACAGCCAACACAGTGTCAAGGTCCATTCGTGCAGGCATTGTTTGGATAAACTGTTATTTTGCCTTTGGGAATGACATTCCTTATGGAGGGTACAAGATGAGTGGATTTGGAAGAGATTTTGGAATGGAAGCCCTACACAAGTATCTTCAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCCTGGCTTTGA 1515 0.4356 MAAALSNGNDHEATFFKIPTINFTKLFINGQFLDSLSGKEFETRDPRTGEVITRIAEGRKEDIDVAVKAARVAFDYGPWPRMPGAERAKIMMKWADLIDENIEEIAALDAIDAGKLYHWCKAVDIPAAASTIRYYAGAADKIHGEVLKPSREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAQLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDKVSFTGSTEVGREVMRAAANSNLKPVSLELGGKSPLIVFDDADVNKAAELALLGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAKSWVVGDPFDPKSQQGPQVDKKQFEKIISYIELGKKEGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFKTIEEAIKIGNNTRYGLAAGIVTKSLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPIYNSPWL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0150 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 270 277 IPR029510 GO:0016491
Aed7g0150 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 463 IPR016163 GO:0016620
Aed7g0150 504 SUPERFAMILY ALDH-like 16 500 IPR016161 GO:0016491
Aed7g0150 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 298 309 IPR016160 GO:0016491
Aed7g0150 504 Pfam Aldehyde dehydrogenase family 37 494 IPR015590 GO:0016491
Aed7g0150 504 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 8 504 - -
Aed7g0150 504 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 8 504 - -
Aed7g0150 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 492 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0150 Aed-Chr7 1039097 1043959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0150 5 504 Aldehyde Dehydrogenase Gene Family AT3G24503 70.858 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0150 K12355 - gmx:100791396 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2515 5 26175366 26178609 Aed7g0150 7 1039097 1043959 PCT