Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0129 ATGGAAGTAGCATCGCGATCTGGCCGTTCAATATTTACTACTAAATTGAATTTTCAAAAGCTTCGAAGAGAGAGGGAGTGTGTGTGTTTGTATAAGTGTAAGTTTGTGTTTGTGTTGCGTTTTCTTCTCCTTCTTCTTCTTCCTCCACTCTTACCTTCTTCAAATCCCACACTTCTTCTTCCCTTTCCCTTTCTACAATCCCAACAACCTCCTTCTCTCTCTCTCTCTCCACAGCTCCCTCTCCTCGTGCGCCGCGTTTGGATCCACGCGCCGCTCAATTTCGCAACAGTCGCAGCAATCCCGAGCTGCGCAATCCACGCGCGCAGTGTTCGAATTCGAGCTGCGTTTTCAAACTATCGCCGCTTTCTTTCGCTGAATACCCGTAATCGTAGGTCGTTTTCGCCGGAATTCCGAATTCGCGGTGAGAGTTTTCGGATTTTGTTTTGCTTCGCGTGCCATGGGGGAAGGTATTGTGAATGTTTTGCATCAGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTTCAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACCTTAGAGCGCAATCCTAATGCATTTAGGCCAAAAATTGCTAGCAGTCCTCATGGAACACGTGATAGCAGGGAGGAGGCTGGGGAAGTTTTAATATTAGGAAAACATAACAAGGGGTGTCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTTCATGGAGATCAAAATAGCATGGCATATATTCAGCAAGCAGCAAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCTATGCATCGCCTCCAGTTTCCAAGAAAAGAAAAGGCCAGGAACTCTTCTTTTGGCCTACAACCAAGGATCCATCCATTAGCAAGTTGGGGCAACAGGTAAACCACGTCAGAGGTCCAACACCTTCCTCATCCTTGTCACCTGTCTCAGGTGCTCGTGTTGGTACTGCCACATTAGGTCCTTCAAAATTTATGTACAGGTCTCTTTTAGCAGACATTATACAACCACAGCACCTCAAGGAGCTATGCTCAGTTCTGGTGCTAGTATCAGGACAAACTGCTAAGACACTTACAGACCAAAAAATTTTAATGGAAAAGCATGCAGAAGATCAGACGGATACTTCCCTTGCTTCTTCAAGTCAAGAGCAATTACCAAGTCAAAAGGAAGGTCATGTTGAGAAGACTGTGGCTGATGATTGTTCGAGTGCAAACCAAACAGATAAAATCAGCCCAGAGAATTCCAGTTCAGATGGTGCTGATGTCCCAAAAGGGAGGCCAATGTCTCCTGGGACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGGCAGCCACCTCCCCCATTGCGCCAATGGCCCATGCTTGTAATACATCTTCACAATTTCCTTATGGACAAGGGATGACAGAGGTCTATGCTGAGCAAGAAAGGATTGTATTAACAAAGTTTAGAGATTTTCTCAATAGGGTTATCACTATGGGAGAAATAAATGGCAAGTTAATGTTTTTCTCTTTTTAA 1638 0.4396 MEVASRSGRSIFTTKLNFQKLRRERECVCLYKCKFVFVLRFLLLLLLPPLLPSSNPTLLLPFPFLQSQQPPSLSLSPQLPLLVRRVWIHAPLNFATVAAIPSCAIHARSVRIRAAFSNYRRFLSLNTRNRRSFSPEFRIRGESFRILFCFACHGGRYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNSMAYIQQAANAAITGAIGSSGYASPPVSKKRKGQELFFWPTTKDPSISKLGQQVNHVRGPTPSSSLSPVSGARVGTATLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQTAKTLTDQKILMEKHAEDQTDTSLASSSQEQLPSQKEGHVEKTVADDCSSANQTDKISPENSSSDGADVPKGRPMSPGTLALMCDEQDTMFMAATSPIAPMAHACNTSSQFPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINGKLMFFSF 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0129 545 ProSiteProfiles CRC domain profile. 146 266 IPR005172 -
Aed7g0129 545 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 157 537 - -
Aed7g0129 545 PANTHER TESMIN/TSO1-RELATED 157 537 IPR028307 -
Aed7g0129 545 MobiDBLite consensus disorder prediction 437 456 - -
Aed7g0129 545 MobiDBLite consensus disorder prediction 407 470 - -
Aed7g0129 545 SMART CXC_2 147 181 IPR033467 -
Aed7g0129 545 SMART CXC_2 226 267 IPR033467 -
Aed7g0129 545 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 229 263 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0129 Aed-Chr7 895993 904540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0129 157 536 CPP Transcription Factor Family AT4G29000 65.885 4.74e-168 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aed7g0129 TCR 2.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0129 - - gmx:100818116 722.235