Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0118 ATGGATCATCCTCCACCCAAGACTTGGACCATCCACACCCGCTCCGAGATAGCCGCCAAGTACGAGGTTCTCGGCCGTGTCGGCTCGGGCGCCTACGCCGACGTCTACCACGCACGGCGCCTCTCGGACGGCGCCGCGGTGGCGCTGAAGGAGGTCCACGATTCCCAATCCGCCTCGCGCGAAATCGAGGCCCTGAGGCTTCTAAAAGGGTCACGAAACGTCGTCGCGTTGCACGAGTTCTTCTGGCGCGAGGACGAGGACGCGGTGCTCGTGCTTGAGTTTCTCGGAACGGACCTCGCCACCGTGATCGGAGAAGATGGTGGTGTCGGTGCTGGCGAGGTTAAGAGGTGGATGCTGCAGGCTCTGAGTGCCGTGGATGAGTGTCATAGGAACATGATCGTGCATAGAGACTTGAAGCCCGCCAATTTTTTGGTTTCTGATGATGGGGTTCTCAAGTTAGCGGATTTTGGACAGGCAAGGATACTGGTGGAGTCTGGATTTGATGCTCCCCAGGAGAACCCGCCACCATATGAAGATAATGATGCTTCAAATAGTGAAAGCTCACTCCAACATCCGGAAGCTACTACTTCTCAATTAGTTAACTTAAACCAAACTGGATATGAAAATCCAAATCAGGGAACCGTGAGTCATGAAGAATATTTTAGAGTTTTGGATGAGATGAAAACCAAGAGCTACTCATATGACACTGATAAGGATACAAACATCTATGATGGAAACACCTCATGTCTTGCAACATGCACAACAAGCGACGTAGATGATGATATTTGGAAGGGTTCTTTTACATATGAAGCTGAGGAGGAGGTAGGAGGGAATGAACTTGGTTGTCTCACATCATGTGTTGGAACTCGGTGGTTCCGGGCACCTGAACTACTCCATGGATCCACAGACTATGGTCTAGAGGTTGATCTTTGGTCATTGGGGTGCGTCTTTGCAGAGCTCTTAACACTGAAGCCATTGTTTCCTGGAACAAGTGATGTAGATCAGCTCAGCAGAATTGTAAGTGTTTTGGGGAGCATTAATGAGGAAACTTGGCCTGATTATGGACCAATCTCATTTGGTAAGGTGAAAAACCATAGTGGTCTTGAAGCATGCATTCCCAATTGCACCCCTGATGAAGTTTCTCTAATCAAAAGACTGGTTTGTTATGATCCTATTAAGAGAGCCACGGCAATGGAGTTACTTCAGGACAAGTACTTCAGTGAAGAACCTCTTCCTGTTCCTATTTCTGAGTTGCGGGTTCCTTTGACTAGAAAGGGACAAGACCAGGATTCTGATTCTGATTTGGAGGAGTTTGGCACCTTGAATATCACCACAACTGGTTCTGATTTATCTACACAGATCCCTTGA 1368 0.4854 MDHPPPKTWTIHTRSEIAAKYEVLGRVGSGAYADVYHARRLSDGAAVALKEVHDSQSASREIEALRLLKGSRNVVALHEFFWREDEDAVLVLEFLGTDLATVIGEDGGVGAGEVKRWMLQALSAVDECHRNMIVHRDLKPANFLVSDDGVLKLADFGQARILVESGFDAPQENPPPYEDNDASNSESSLQHPEATTSQLVNLNQTGYENPNQGTVSHEEYFRVLDEMKTKSYSYDTDKDTNIYDGNTSCLATCTTSDVDDDIWKGSFTYEAEEEVGGNELGCLTSCVGTRWFRAPELLHGSTDYGLEVDLWSLGCVFAELLTLKPLFPGTSDVDQLSRIVSVLGSINEETWPDYGPISFGKVKNHSGLEACIPNCTPDEVSLIKRLVCYDPIKRATAMELLQDKYFSEEPLPVPISELRVPLTRKGQDQDSDSDLEEFGTLNITTTGSDLSTQIP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0118 455 PANTHER CELL DIVISION PROTEIN KINASE 14 424 - -
Aed7g0118 455 Gene3D Transferase(Phosphotransferase) domain 1 12 176 - -
Aed7g0118 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Aed7g0118 455 SUPERFAMILY Protein kinase-like (PK-like) 6 423 IPR011009 -
Aed7g0118 455 MobiDBLite consensus disorder prediction 422 455 - -
Aed7g0118 455 Pfam Protein kinase domain 21 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0118 455 Pfam Protein kinase domain 283 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0118 455 ProSiteProfiles Protein kinase domain profile. 21 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0118 455 SMART serkin_6 21 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0118 455 MobiDBLite consensus disorder prediction 436 455 - -
Aed7g0118 455 PANTHER CYCLIN-DEPENDENT KINASE 10 14 424 - -
Aed7g0118 455 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Aed7g0118 455 MobiDBLite consensus disorder prediction 167 195 - -
Aed7g0118 455 Gene3D Transferase(Phosphotransferase) domain 1 245 410 - -
Aed7g0118 455 MobiDBLite consensus disorder prediction 177 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0118 Aed-Chr7 809751 811730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0118 1 455 Core Cell Cycle Gene Families AT4G28980 56.584 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Aed7g0118 Pkinase 6.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0118 - - gmx:548056 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2493 5 26060859 26062717 Aed7g0118 7 809751 811730 PCT