Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0113 ATGGAAACCCCTCAAAACCTCGAGGAGGAGCCGCAGGAATTTGACTTCAAACTACTTTGCTCATATTTGTCTTCTAACATTCTTAAACAAATTCCTCTCCTTGATTCCCCAGATCATGCTGTCGTCCACAGGGCCATCTCGGTCATCTCACAATATGTTTGGCGCAATTTCTGTATTGGAAAGGACCGCATGGATACTGTAGTCAGCTGTAGTGTGGTCTCTGCTCTAATAAGGCATCTTCGAGCTTCAGACGCTCAGCGCGTACATTACCAGCATAAGCTGGAGTCAGGATGTGCTTACATCCTCATGGTTGTTGCCACTAGATTAGAGCTACAGCAATTCATTGTAGATGCTGGAGCCCTGCCCTGTCTGATAGATTTGTTAAGAAGGCACAAGATCTGTACAATTTCTCCAGAACTAATTCAACTTCTAAGGAAAGCTGCTGAAGCAATATGCAACATTGTTCGTGCAAATACCACCATCAAGACCCTTGTCAGGATGGAAGGTGGTATCCCTGTTCTTGTTGAATTGCTTGAATTCAATGCCACAGAGGTACAGAGGGCAGGATTAAGGGCCTTGAGAAATCTTACATTTGATAACGATGAGAACAGGAAACAGATTGTTGAATGCAACGCATTATCCAATCTGGTACTAATGCTTCGATCAGAGGATCCTACAATACAATACCTATCGGTTACGATGATTTCCGATCTGTTTGTCTCTTTACCAGATATTAAGAAAGAAGTTCTAGATGAGGCTGTACAACCCATTATTTGTTTACTTAATTCATGCTGTTCGAAGAGCCAAATTGCAGCAGCCTTTTTACTTGGCCAATTTATTGCAACAAATTCAGATTACACGGTTCATATTTCCCAAAGAGGGGCTATTCCACCATTAGTTGACATGCTTAAGTCTCCAAATACAGAGCTTCAGCGAACATCAATTTTTATACTTGGGAAATTGGCACAGGACTCGCATAATCAAGCTGGTATTGCTCATAGCGGAGGTATAGAGCCTCTGCTCAATCATCTTGACTCAAACTATACAGTTCACCTCCAACAAAATGCTGCTTTTATGCTCTATTGTCTTGCCAAGAATGAGGACATTGTTGCAGATATTATTAAGGTTGGGGGTTTTCAAAAATTGAAGGATGGACATTATGAAGATGAAGCTACTAAAAGGAACGTAGCAATTGTCATAAAAGTATTAAAGGAGAAGATGCAAGGGCAAGTGAGTTTTCTTGCGAATGCTATGCTGGTATTGAAACGCCTAGTACATCTTGTGCGCTTTGCGGAAAGAGGGGTTCAAAGACTTGTAGCTCTTGCTCTTGCTTGTTTATGTTCTCCTCGTGATTGTAAAACTATATTCATTGACAATAATGGATTAGAAATACTGCTCAATATGCTTGAATCTCCAAATGTAACGCAGAAGGGTGCTACTTCAGAGGCGCTTCACAAATTGGCTGTCAAAGCAAGTTCTTCTATCTCTCTTTTTGATATTGCTTCTCCATCACTAACTCCCCAGATGTACTTGGGCGAGGAATATATAAACAACATTAAACTTTCTGATGTCACATTCCTGGTTGAAGGTAGAAGTTTTTATGCTCAAAGAGATTGTTTACTTTCTTCTTCTGATATATTTCAGACGATGCTTGATGCCAGTTGTAGGGAAAGGGAAGGCAAACATGTAGTAGTGATTCAAAATATTAAATGGGATGTCTTTGAATTGATGATGAGATTTATATGCACCGGAACAGTTTATGTCAATGTGGATATTGCTCAAGACCTCCTCATAGTTGCAGATCAATATCATCTAGACGGCCTTAAGCGTATTTGTGAACATGTTATTCTTCAGGATATTTCTGTGGAAAATGTTGCACTTATGTATGAGATGTCGGAGAATTTCAATGCTACTACATTAAAACATGCATGTATATTGTTTATGCTGGAGAAATTTGATGAACTGAGTTCTAAACAATGGTATTGTCCACTGGTGTGTCGCATTGTACCAGACATACGCATGTTCTTTTCAACTTTACTAATCAAGTCTCATCAAGCTGACTTTTAA 2067 0.3972 METPQNLEEEPQEFDFKLLCSYLSSNILKQIPLLDSPDHAVVHRAISVISQYVWRNFCIGKDRMDTVVSCSVVSALIRHLRASDAQRVHYQHKLESGCAYILMVVATRLELQQFIVDAGALPCLIDLLRRHKICTISPELIQLLRKAAEAICNIVRANTTIKTLVRMEGGIPVLVELLEFNATEVQRAGLRALRNLTFDNDENRKQIVECNALSNLVLMLRSEDPTIQYLSVTMISDLFVSLPDIKKEVLDEAVQPIICLLNSCCSKSQIAAAFLLGQFIATNSDYTVHISQRGAIPPLVDMLKSPNTELQRTSIFILGKLAQDSHNQAGIAHSGGIEPLLNHLDSNYTVHLQQNAAFMLYCLAKNEDIVADIIKVGGFQKLKDGHYEDEATKRNVAIVIKVLKEKMQGQVSFLANAMLVLKRLVHLVRFAERGVQRLVALALACLCSPRDCKTIFIDNNGLEILLNMLESPNVTQKGATSEALHKLAVKASSSISLFDIASPSLTPQMYLGEEYINNIKLSDVTFLVEGRSFYAQRDCLLSSSDIFQTMLDASCREREGKHVVVIQNIKWDVFELMMRFICTGTVYVNVDIAQDLLIVADQYHLDGLKRICEHVILQDISVENVALMYEMSENFNATTLKHACILFMLEKFDELSSKQWYCPLVCRIVPDIRMFFSTLLIKSHQADF 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0113 688 Gene3D Potassium Channel Kv1.1; Chain A 513 659 IPR011333 -
Aed7g0113 688 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 294 336 IPR000225 GO:0005515
Aed7g0113 688 SUPERFAMILY POZ domain 520 619 IPR011333 -
Aed7g0113 688 SUPERFAMILY ARM repeat 143 488 IPR016024 -
Aed7g0113 688 Gene3D - 23 247 IPR011989 -
Aed7g0113 688 ProSiteProfiles BTB domain profile. 522 590 IPR000210 GO:0005515
Aed7g0113 688 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 8 687 - -
Aed7g0113 688 Pfam BTB/POZ domain 515 618 IPR000210 GO:0005515
Aed7g0113 688 SMART arm_5 449 489 IPR000225 GO:0005515
Aed7g0113 688 SMART arm_5 324 365 IPR000225 GO:0005515
Aed7g0113 688 SMART arm_5 283 323 IPR000225 GO:0005515
Aed7g0113 688 SMART arm_5 108 156 IPR000225 GO:0005515
Aed7g0113 688 SMART arm_5 158 198 IPR000225 GO:0005515
Aed7g0113 688 SMART arm_5 242 281 IPR000225 GO:0005515
Aed7g0113 688 SMART arm_5 200 240 IPR000225 GO:0005515
Aed7g0113 688 SMART BTB_4 522 620 IPR000210 GO:0005515
Aed7g0113 688 Gene3D - 248 503 IPR011989 -
Aed7g0113 688 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 169 204 IPR000225 GO:0005515
Aed7g0113 688 Pfam Armadillo/beta-catenin-like repeat 164 197 IPR000225 GO:0005515
Aed7g0113 688 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 119 169 IPR000225 GO:0005515
Aed7g0113 688 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 8 687 IPR044282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0113 Aed-Chr7 776190 781216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0113 116 345 U-box Gene Family AT2G23140 28.926 3.14e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed7g0113 BTB 7.1e-17 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0113 - - gmx:100783124 745.732