Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0110 ATGTCTGTGCCATTGGAGCAAGGCTATGCAGGCTTATCAGAGGTTCCTTCATTAATGGAAGGTTCTGACAAGTTTTCTGAGAGGACTAGTGGTGGCTTGAACCTCAAGGCTACTGAGCTGAGGCTTGGTCTGCCAGGCTCAGAGTCACCAGAGAGAAATGAAGGTGTGGAGGACAAAAATGAGAACTCTTTAGGCATGGTCAAGAGTTTGTTATCTGGGGCCAAGAGGGGTTTCTCAGACACCATTGATGGAAAGTGGCTTCTCTCTGGGAATGGTGGATCTGAAGTGGGTTTGGGGAAAGATGGTGGCTTGTTCTCTCCAAGGGGCGTTGGTGTTGGTGTTGGTGTTTGTGTTAGTGCTGCCAAGGCTGAGTGTACCAACCAACAAACTGCTGTTGTGAAAGATAAAGTTCCTCAGTCTCCAAAGCCTTTGAATGAGAAGAAGCCTCAGATATCTGCTCCTGCTGCAAAGGAACAAGTTGTGGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCAATGGCCACTCAGCCTGAAAAGAATGATGATGATGCAGAAGCCAAGTCTGGATGCCTTTATGTGAAAGTTAGCATGGATGGTGCTCCATACTTGAGGAAAGTGGACCTCAAAAACTTTGGCACATACATGGAACTCTCTTCAGCACTGGAAAAGATGTTTAGTTGTTTTACAATCAGTCAATGCGGTTCCCATGGAGTTTCTAGTCCAGATAAGTTGAGTGAAAGTAGATTGATGGACCTTCTTCATGGTTCAGAATATGTTCTCACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGATGTTCACTGACTCTTGCAAGAGGTTAA 849 0.457 MSVPLEQGYAGLSEVPSLMEGSDKFSERTSGGLNLKATELRLGLPGSESPERNEGVEDKNENSLGMVKSLLSGAKRGFSDTIDGKWLLSGNGGSEVGLGKDGGLFSPRGVGVGVGVCVSAAKAECTNQQTAVVKDKVPQSPKPLNEKKPQISAPAAKEQVVGWPPIRSFRKNSMATQPEKNDDDAEAKSGCLYVKVSMDGAPYLRKVDLKNFGTYMELSSALEKMFSCFTISQCGSHGVSSPDKLSESRLMDLLHGSEYVLTYEDKDGDWMLVGCSLTLARG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0110 282 PANTHER AUXIN-INDUCED PROTEIN 26 274 - -
Aed7g0110 282 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 26 274 IPR003311 GO:0005634|GO:0006355
Aed7g0110 282 MobiDBLite consensus disorder prediction 1 32 - -
Aed7g0110 282 Gene3D - 185 276 - -
Aed7g0110 282 Pfam AUX/IAA family 38 274 IPR033389 -
Aed7g0110 282 MobiDBLite consensus disorder prediction 42 61 - -
Aed7g0110 282 ProSiteProfiles PB1 domain profile. 191 282 IPR000270 GO:0005515
Aed7g0110 282 MobiDBLite consensus disorder prediction 134 158 - -
Aed7g0110 282 SUPERFAMILY CAD & PB1 domains 188 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0110 Aed-Chr7 743648 747016 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aed7g0110 AUX_IAA 6.6e-67 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0110 K14484 - gmx:100803754 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0110 7 743648 747016 Aed7g0110 7 743648 747016 ECH
Aed5g2485 5 26010583 26012784 Aed7g0110 7 743648 747016 PCT