Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0103 ATGGATACCTTCGAGATCGTCGCCGTCAAGATCGAGAACGGTAAAACGAAGCATCCGCAATTGCTTTACGAGGCCAAGCTCTACAATATTCTTCAAGGAGGAAGTGGCATCCCGAGCATAAAATGGTGTGGTGTAGACGGGGAGGATAATGTGCTTGTTATGGACTTGCTGGGACCAAGTCTCGAGGATCTTTTTGTTTACTGTGGAAGAAAATTCTCCCTCAAAACCGTGTTGATGTTGGCTGATCAAATGTTGTCAAGAATAGAATATGTGCATTCTAAAGGATTCTTACACAGGGATATAAAACCTGACAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCAGGTTTACATAATTGATTTTGGTCTTGCAAAACGGTATAGGGACTCCTCAACTAATCGCCACATCCCTTACAGCCTTCCTTGGCAAAACCTAAAGGCTGCAACAAAGAAGCAAAAGTATGATAAAATTTGTGAGAAGAAAGTATCAACCCCTATTGAGGTAAGTTATGAATTTGATTATGTATTTGATTGGACTATTTTAAAGTACCAGCAGGCACAAAAGAATAGAGTCCAGCCTCGCATATCTACAGTCCCTGGAACAAGCAACGGTCCTGCAATGCCAATGGATGTGGACAACCATCGAGGGGATGTCTCAGCAGAACGCATCAAAACAGGCAATCTTACTGGTTCTGGTGTTAAAATTCAGTTTAAATCACCAGTTGTTAAAAATTTGGGTTCTGAAAAGCCGCTGGACAAGAATATTTTTGGTGAAGCAAATATACCCTCTACCTCGTACTCTCTTGCTGGTACCTCAAAAAGGAATTCCTTGAAGCCTGTCTTGTCCACTGAAGCTGCTAATCCTGGTCATGGGCAAGGAAGTAATAAAATTGGCCCTTCAAGTAGCTGGATTTCATCTGTGCAGCGCATATCTTCTGCCAAATAA 948 0.423 MDTFEIVAVKIENGKTKHPQLLYEAKLYNILQGGSGIPSIKWCGVDGEDNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMLSRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSSTNRHIPYSLPWQNLKAATKKQKYDKICEKKVSTPIEVSYEFDYVFDWTILKYQQAQKNRVQPRISTVPGTSNGPAMPMDVDNHRGDVSAERIKTGNLTGSGVKIQFKSPVVKNLGSEKPLDKNIFGEANIPSTSYSLAGTSKRNSLKPVLSTEAANPGHGQGSNKIGPSSSWISSVQRISSAK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0103 315 SUPERFAMILY Protein kinase-like (PK-like) 5 175 IPR011009 -
Aed7g0103 315 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3-RELATED 172 298 - -
Aed7g0103 315 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3-RELATED 140 169 - -
Aed7g0103 315 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3-RELATED 1 139 - -
Aed7g0103 315 Pfam Protein kinase domain 5 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0103 315 ProSiteProfiles Protein kinase domain profile. 1 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0103 315 MobiDBLite consensus disorder prediction 285 315 - -
Aed7g0103 315 Gene3D Phosphorylase Kinase; domain 1 1 57 - -
Aed7g0103 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Aed7g0103 315 PANTHER CASEIN KINASE-RELATED 172 298 - -
Aed7g0103 315 PANTHER CASEIN KINASE-RELATED 140 169 - -
Aed7g0103 315 PANTHER CASEIN KINASE-RELATED 1 139 - -
Aed7g0103 315 SMART serkin_6 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0103 315 Gene3D Transferase(Phosphotransferase) domain 1 58 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0103 Aed-Chr7 697573 704252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0103 24 149 EF-hand Containing Proteins AT3G50530 31.008 4.66e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aed7g0103 Pkinase 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0103 K08960 - gmx:100798768 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0103 7 697573 704252 Aed7g0103 7 697573 704252 ECH
Aed5g2480 5 25979031 25985928 Aed7g0103 7 697573 704252 PCT