Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0101 ATGGCTTCTTCAATTCGTCCCTCACTTTCTTCCTTCATGTTACCCTCCCTCTCCTCTTGCAACCCTTCTCAAAAGCTCTCTCTTTTTCATCTCGGTAGCGGTCTTAGACAGTTTCATAAGTTTGGCCTGAAAGCTTCTAGGTTTTTGAGACATGATGATAAGTGCATGAGAGTGATGGCATCTGGGAACATGTCCACAGCTGCTACACATGAAAATGTTCTAGATTGGGTCAAAGATGACAAGAGAAGAATGCTGCATGTTGTGTATCGTGTTGGGGACTTGGACAAGACCATAAAATTTTATAGGGAGTGCCTGGGAATGAAGTTGCTCAGAAAGCGTGACATGCAAGAGCAGAGATATACTAATGCCTTTCTTGGATATGGTCCTGAGGATGCACACTTTGTTGTTGAACTGACATACAATTATGGGATTGAGAAGTATGGCATCGGAGATGGATTTGGCCATTTTGGTCTTGCTGTTGATGATCTTTCAAGAATTGTGGAACTTGTTAGAGCGAAGGGTGGAAAAATTACTAGAGAGCCTAGTCTTGTCAAGGGAGGCAACTCAGTAGTTGCATATATTGAAGATCCTGATGGTTATGAATTTGAACTTTTGGAAAGGGCTCCTGCTCCTGAGCCTTTGTGCAAAGTAATGCTCCGAGTGAGTGATCTTGATCGTTCCATCAAATTTTATGAGAAGGCTTTTGGTATGGAGCTGCTTCGAACACAAGATGATCCAGAATCCAAGAGTACAATAGCAATTATGGGCTATGGTCCAGAGGAAAAAACTACTGTCCTGGAATTGGCTTACAACTATGAAGTCACAGACTATGATAAAGGAGATGCTTATGCTCAGATTGCAATAGGCACAGAAGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGAGGGAAGATTACTCGGGAACCTGGACCAGTACCTGGTATCAAAACAAAGATCACATCATGTGTGGATCCTGATGGTTGGAAAACTGTTTTTGTAGATAATGTTGACTTTCGTAGGGAGTTGGAGTAG 1038 0.422 MASSIRPSLSSFMLPSLSSCNPSQKLSLFHLGSGLRQFHKFGLKASRFLRHDDKCMRVMASGNMSTAATHENVLDWVKDDKRRMLHVVYRVGDLDKTIKFYRECLGMKLLRKRDMQEQRYTNAFLGYGPEDAHFVVELTYNYGIEKYGIGDGFGHFGLAVDDLSRIVELVRAKGGKITREPSLVKGGNSVVAYIEDPDGYEFELLERAPAPEPLCKVMLRVSDLDRSIKFYEKAFGMELLRTQDDPESKSTIAIMGYGPEEKTTVLELAYNYEVTDYDKGDAYAQIAIGTEDVYKTAEAIKLAGGKITREPGPVPGIKTKITSCVDPDGWKTVFVDNVDFRRELE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0101 345 TIGRFAM glyox_I: lactoylglutathione lyase 214 340 IPR004361 GO:0004462|GO:0046872
Aed7g0101 345 TIGRFAM glyox_I: lactoylglutathione lyase 71 215 IPR004361 GO:0004462|GO:0046872
Aed7g0101 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 215 337 IPR029068 -
Aed7g0101 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 210 IPR029068 -
Aed7g0101 345 PANTHER LACTOYLGLUTATHIONE LYASE 11 345 - -
Aed7g0101 345 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Aed7g0101 345 Gene3D - 54 208 IPR029068 -
Aed7g0101 345 Gene3D - 211 345 IPR029068 -
Aed7g0101 345 ProSitePatterns Glyoxalase I signature 1. 86 107 IPR018146 GO:0004462|GO:0046872
Aed7g0101 345 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 11 345 - -
Aed7g0101 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 84 204 IPR004360 -
Aed7g0101 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 217 331 IPR004360 -
Aed7g0101 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 83 207 IPR037523 -
Aed7g0101 345 CDD GlxI_Ni 84 205 - -
Aed7g0101 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 213 337 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0101 Aed-Chr7 678058 681719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0101 216 334 Calmodulin-binding Proteins AT1G08110 26.897 9.60e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0101 K01759 - gmx:100802155 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0101 7 678058 681719 Aed7g0101 7 678058 681719 ECH
Aed5g2478 5 25966248 25970724 Aed7g0101 7 678058 681719 PCT