Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0099 ATGAATCAACAACTTGGTGGTGTTATCCTTTTGGTTCTCTCCTCAGTCTTGTTCCTCCATGACCATGTTAGAGCACAGTCACAGACTGCACCTTCTTCAGGAGATGCTGTCTCCAATTTCCAACCAAGCCTTGCTGTTGTCATAGGAATCCTTGGTATCATGTTCTTGCTCACATTCTTTCTTCTCATGTATGCAAAATTCTGTCAACGCCGCAGCGCTTCAGCACCACCAGAAAATCAATTCAGTACTCTTGTGCGATCAAGGTCTAGATTCTCAGGAATTGACAAGACTGTGATAGAATCACTCCCCTTCTTCAGATTCTCTTCACTCAAAGGGTCAAAGCAAGGGCTTGAATGTGCAGTGTGCTTATCAAAGTTTGAAGATGTTGAAATTCTCAGACTTTTACCAAAGTGCAAGCATGCTTTTCATATTGATTGCATAGACCACTGGCTTGAAAAACACTCTACCTGTCCTATTTGCAGGCACAGGGTCAACCCTGAGGACCACACAACCTTCACATATTCAAACAGTTTAAGAAGGCTAGCAAATCAGTCAGAGCTTGGTGATCAAGAATCTAACATAGAGGTCTTTGTCCAGAGAGAGGAAGAGCATCATGGTTCATCAAGATTCAGTGTTGTTGGAAGCAGCTTTCGGAAAACAGTCAAGGAAGAAGAATTGCTCATCCAAAATGGAACAGAAGATAGTGATGGTAACCAGAAGGGGTATCAGTATCATAAACACAACCACAAGATTACTATATCTGATGTTGTGTTCAAGCACAGGTGGAGCAACGTCAGTTCTTCAGACCTTATGTTTCTGAATTCGGAGATGCTGAATGATACATCAAGCAACAGATTCAGCAACTTGGAATCAAATGCTGACATCATCATGATGTCAACTACTACAAGAGGGGAGGTGGAAAATGAACAAATTATGAACATCAAGGAGGAGATGGAGAGGAAGATTTCATTTGAGAGCAAAGTTGGTGCACTAAACAACATGAAGAAATCAGTTTCGGATAAGGATCCTCCTTTTGCATCAAGTCATGCACCAAAGTGTGTGACTGTGAACCCGGGTGAGAAAAGGTCAATGTCAGAAATCACTGCTGTTTCTAGATTTGGAGATTTAGGCATGAAGATAAGGGTCTTTAAAGATTCTTCTTCCCTTCAAAACAACCTTAAAGAGGAAAGAATGAGGCAGATTTGGTTTCCAATTGCCAGAAGAACAGCTCAATGGTTTGTGAATAGAGAAATAAGGTCTCAGCAATCTCAGAATAAACAACAGCCATTAGATGTATAG 1299 0.4119 MNQQLGGVILLVLSSVLFLHDHVRAQSQTAPSSGDAVSNFQPSLAVVIGILGIMFLLTFFLLMYAKFCQRRSASAPPENQFSTLVRSRSRFSGIDKTVIESLPFFRFSSLKGSKQGLECAVCLSKFEDVEILRLLPKCKHAFHIDCIDHWLEKHSTCPICRHRVNPEDHTTFTYSNSLRRLANQSELGDQESNIEVFVQREEEHHGSSRFSVVGSSFRKTVKEEELLIQNGTEDSDGNQKGYQYHKHNHKITISDVVFKHRWSNVSSSDLMFLNSEMLNDTSSNRFSNLESNADIIMMSTTTRGEVENEQIMNIKEEMERKISFESKVGALNNMKKSVSDKDPPFASSHAPKCVTVNPGEKRSMSEITAVSRFGDLGMKIRVFKDSSSLQNNLKEERMRQIWFPIARRTAQWFVNREIRSQQSQNKQQPLDV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0099 432 CDD RING-H2_PA-TM-RING 118 161 - -
Aed7g0099 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 170 IPR013083 -
Aed7g0099 432 SMART ring_2 119 160 IPR001841 -
Aed7g0099 432 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 426 - -
Aed7g0099 432 SUPERFAMILY RING/U-box 99 167 - -
Aed7g0099 432 Pfam Ring finger domain 118 161 IPR001841 -
Aed7g0099 432 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 426 - -
Aed7g0099 432 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0099 Aed-Chr7 670855 672153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0099 18 428 C3H Transcription Factor Family AT4G28890 48.980 9.46e-117 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0099 K10664 - gmx:100803207 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0099 7 670855 672153 Aed7g0099 7 670855 672153 ECH