Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0098 ATGGGTTGCATTTACTCGCGAGTCTGCATAGGCGACAACTGCAGAGGCTCCAGCATCAACGGAGACCCTATCGCGCGAAACGACGTCGGCGAAGTCGCGAATTTCTCGCCATCCTCTTCGGATGTTGAAGAAGGCGAAATCAGAGACCAATTGAACCAATTGAGCATCACGCGAGACTCCGAAGCCGGAATCCGAAGACTCGCTAGGGTTTCCGCGCAGTTTCTCCCACCGGACGGTTCTCGAATCGTTAAGGTTCCTTCTGGAAACTTCGAATTGCGATACTCCTTCTTGTCCCAACGAGGCTACTACCCAGATGCACTCGATAAAGCTAACCAAGACAGTTTCTGCATCCACACACCTTTTGGTACGAGTCCTAACGACCACTTCTTCGGCGTCTTCGACGGCCATGGTGAGTTCGGAGCTCAGTGTTCTCAGTTCGCGAAGCGGAAACTGTGTGAGAATTTGCTCAGGAACTCTAAATTCCGAGCTGATCCTGTTGAGGCTTGTCATGCGGCGTTTTTGGCAACGAATTCGCAGCTACACAATGATGTTTTGGATGACAGCATGAGCGGGACGACGTCGATCACGGTGCTGGTGAGAGGGAGGACGATATACGTGGCGAATTCCGGCGATTCGAGGGCGGTGATCGCGGAGAGGAGAGGGAAAGAAATTGTGGCCGTTGATTTGTCTATTGATCAGACTCCATTCAGGAGTGATGAGCTTGAGAGGGTGAAGATGTGTGGGGCGAGGGTTCTTACTTTGGATCAGATAGAAGGGTTGAAGAACCCAGATGTGCAATGTTGGGGCACTGAAGAAGGTGATGATGGTGACCCTCCGAGGTTGTGGGTGCCCAATGGGATGTACCCTGGGACGGCCTTCACGAGGAGTATTGGTGATTCCATTGCTGAGACTATTGGAGTTGTGGCCAATCCTGAGATTGTTGTGTTTGAGCTCACGCAAGATCACCCTTTCTTTGTCATTGCCAGTGATGGGGTGTTTGAGTTTCTCTCTAGCCAGACTGTGGTTGAAATGGCTGCGAAATTTAAAGATCCCCGTGATGCTTGTGCTGCAATTGTGGCAGAATCTTATCGGCTCTGGCTTCAGTATGAAACTCGTACAGATGACATTACAGTCATCATTGTGCATATAAATGGGCTAACTGAATCTTCTGTTGGTCAGTCAGCAAGTTATGGTGATGTTTTGCGAAACCCTGTGCCTCAAGTTATAGAGGTGACAGGTTCAGAATCCCCTTCGACCTTTGGCTGGAGTGCTAGAAACCATCGTGTAAGGCATGACTTGTCAAGAGCACGCCTCCGAGCACTTGAAAATTCCCTAGAAAATGGTCAAGCTTGGGTTCCTCCATCTTCAGCCCATAGAAAGACATGGGAAGAAGAAGCACACATAGAGCAGGCGTTGCATGATCATTTTCTCTTCCGAAAACTTACTGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTGGAGGTCCAACCTGGGGATATTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCGACTCAGGAAGAAAAAGATGGGGAGGTACCTAGGGTTTTGCAGCGCTACACAGCTGAAAAACTTTCATGCTTTGGAGAACTTGCTCTAATGTACAATAAACCCCTTCAGGCTTCTGTGCGTGCTGTAACAAAAGGAACTCTTTGGGCTTTAAAACGAGAAGATTTTCGAGGGATTTTAATGTCAGAATTCTCTAACTTGTCATCATTGAAGTTGCTTCGGTCTGTAGATCTCCTCTCAAGGTTGTCAATTTTACAACTCAGTCAGATTTCTGACTCCCTTTCTGAAGTTTCCTTCTCAAATGGACAGACAATAATAGACAAAAATGAAGTCCTTGCATTGTACATTATCCGGAAGGGACAAGTGAAAATCACTTTTGATTCTGATTTATTGACAAGTCCAAATGCCTACAGCCTCAAGCCTGACATCCAAAATGAGGATGATGTACAGAGCAGAAAAGAACTGTCAATAGAGAAGCCTGAGGGAAGCTATTTTGGTGAATGGGCCCTTCTTGGTGAAAATATTGGTACCTTGAGTGCTGTTGCTGTGGGTGATGTTGTATGTGCTTTATTAACAAAGGACAAATTTGAATCTGTTATTGGCTCCTTACAAAAGATTTCTCAGGAAGATCACAAGTCAAGGAATTACTCCAAGGAGTTGACTAGAAATTATGATTTTTCATCCCTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACGCTATATTCGACTGACTGCTCTGAAATAGGGCTTGCAAATTTAAGAGATTCAGAAAATATGCTTACTTTGAAGAGATTTTCTAAGTCAAGGGTGAAAAGGCTAGGAAAAGAATCACAGGTCTTGAAAGAGAAAGATTTGATTAAGAGTATGGGCTCTTCAACCTGTATACCACAGGTTTTATGCACTTGTGCTGACCACATGTATGCTGGAATACTGCTAAATACTAGCCTTGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCATTTAGTGAATCAGCAGCTCAGTTTTGTGCTGCTTCTGTTGTTACTGCCTTAGAAGACTTGCACAAGAATGGTGTTCTCTACAGAGGTGTGTCACCTGATGTTTTGATGTTGGAACAAACTGGACATATACAGCTGGTGGACTTCAGATTTGGAAAACAGCTTTCTGGTGAGAGAACATTCACAATATGTGGGATGGCAGATTCACTGGCTCCAGAGATTGTTTTGGGAAAAGGCCATGGTTTCCCTGCTGACTGGTGGGCGTTGGGAGTTTTAATATATTTTATGTTACGTGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTTGATACAATTGCCAAAATTGCAAAAAGGAAGCTACATCTTCCCGAGATATTTAGCCCTGAAGCTGTTGATCTCATCTCCAAGCTACTTGAAGTGGAAGAAAACACTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAGAGTCACTCGTGGTTTAATGGCATTGATTGGGAAGGCATTAGACACCACACCTTTCCCGTTCCTCAAGAAATTGTTTCTCGTATAACACAGTACTTGGAAGTTCATTCTGAGGATTGTAGTACTGGTTATCTCGGGTCCCCATTACACGAGGTAAAAGAACTTAATGTGCCCGAATGGCTTGAGGAGTGGTAG 3225 0.4493 MGCIYSRVCIGDNCRGSSINGDPIARNDVGEVANFSPSSSDVEEGEIRDQLNQLSITRDSEAGIRRLARVSAQFLPPDGSRIVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSPNDHFFGVFDGHGEFGAQCSQFAKRKLCENLLRNSKFRADPVEACHAAFLATNSQLHNDVLDDSMSGTTSITVLVRGRTIYVANSGDSRAVIAERRGKEIVAVDLSIDQTPFRSDELERVKMCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTQDHPFFVIASDGVFEFLSSQTVVEMAAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHINGLTESSVGQSASYGDVLRNPVPQVIEVTGSESPSTFGWSARNHRVRHDLSRARLRALENSLENGQAWVPPSSAHRKTWEEEAHIEQALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDIIVKQGGEGDCFYVVGSGEFEVLATQEEKDGEVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVSFSNGQTIIDKNEVLALYIIRKGQVKITFDSDLLTSPNAYSLKPDIQNEDDVQSRKELSIEKPEGSYFGEWALLGENIGTLSAVAVGDVVCALLTKDKFESVIGSLQKISQEDHKSRNYSKELTRNYDFSSLDKVQLSDLEWRKTLYSTDCSEIGLANLRDSENMLTLKRFSKSRVKRLGKESQVLKEKDLIKSMGSSTCIPQVLCTCADHMYAGILLNTSLACPLSSILSSPFSESAAQFCAASVVTALEDLHKNGVLYRGVSPDVLMLEQTGHIQLVDFRFGKQLSGERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTIAKIAKRKLHLPEIFSPEAVDLISKLLEVEENTRLGSQGPDSVKSHSWFNGIDWEGIRHHTFPVPQEIVSRITQYLEVHSEDCSTGYLGSPLHEVKELNVPEWLEEW 1074
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0098 1074 Pfam Protein kinase domain 779 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0098 1074 SMART cnmp_10 477 600 IPR000595 -
Aed7g0098 1074 SMART cnmp_10 603 740 IPR000595 -
Aed7g0098 1074 Gene3D - 88 384 IPR036457 -
Aed7g0098 1074 SUPERFAMILY PP2C-like 81 385 IPR036457 -
Aed7g0098 1074 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Aed7g0098 1074 Gene3D Transferase(Phosphotransferase) domain 1 847 1032 - -
Aed7g0098 1074 Gene3D Phosphorylase Kinase; domain 1 760 846 - -
Aed7g0098 1074 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 36 1051 - -
Aed7g0098 1074 SUPERFAMILY cAMP-binding domain-like 443 587 IPR018490 -
Aed7g0098 1074 CDD CAP_ED 603 726 IPR000595 -
Aed7g0098 1074 CDD CAP_ED 477 586 IPR000595 -
Aed7g0098 1074 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Aed7g0098 1074 SUPERFAMILY Protein kinase-like (PK-like) 747 1046 IPR011009 -
Aed7g0098 1074 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Aed7g0098 1074 Pfam Cyclic nucleotide-binding domain 622 725 IPR000595 -
Aed7g0098 1074 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 36 1051 - -
Aed7g0098 1074 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Aed7g0098 1074 PRINTS cAMP-dependent protein kinase signature 721 733 - -
Aed7g0098 1074 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Aed7g0098 1074 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Aed7g0098 1074 SMART serkin_6 770 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0098 1074 CDD PP2Cc 109 383 IPR001932 -
Aed7g0098 1074 SUPERFAMILY cAMP-binding domain-like 595 731 IPR018490 -
Aed7g0098 1074 Pfam Protein phosphatase 2C 123 362 IPR001932 -
Aed7g0098 1074 SMART PP2C_4 89 381 IPR001932 -
Aed7g0098 1074 ProSiteProfiles cAMP/cGMP binding motif profile. 603 742 IPR000595 -
Aed7g0098 1074 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Aed7g0098 1074 Gene3D Jelly Rolls 594 746 IPR014710 -
Aed7g0098 1074 ProSiteProfiles Protein kinase domain profile. 762 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0098 1074 Gene3D Jelly Rolls 450 593 IPR014710 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed7g0098 Aed-Chr7 659779 669155 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0098 1 1074 PP2C-type Phosphatase Gene Family AT2G20050 67.482 0.0 1509
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Aed7g0098 Pkinase 1.5e-32 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0098 - - gmx:100799821 2048.09