Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0096 ATGGCAGAAGAAGCAGATTCGGAGAGAGAAATTCTAGCTATGGAGGAGGAGCAGCTGGAGTTCGTGTTGAACACGGCGGGCATAGTGGAGGACTGCGAGCTGAGCATGCCTTACAGAACACAACTGACTAGTGACAAGTGGAACCTGTTCTTGCTGCGAGTGGAGGAGTTCGAGGATAAGATCCTCTCGGAGTTCTTGAAGGAAGGGGAGGAAAAAGATGTTAAGGAGGGGATGGAAGTGAACGTGTACGATACCGGTGGCCATGAGTTCGAAGCCATTCTCAAGAAATGGGAGAGAGTTTACTACCTCAGCCGTGGCTGGCTCAGCTTCCTGGACGACAAGCTCTTGGCTCAAAACGATTTCGTTTCCTTGCGCGCCTTTCGCCATGCTTTTAACAAAAAGTTGTCCTTCCTTGTTACTTACACCAAAATCAATAATAATTAA 444 0.482 MAEEADSEREILAMEEEQLEFVLNTAGIVEDCELSMPYRTQLTSDKWNLFLLRVEEFEDKILSEFLKEGEEKDVKEGMEVNVYDTGGHEFEAILKKWERVYYLSRGWLSFLDDKLLAQNDFVSLRAFRHAFNKKLSFLVTYTKINNN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0096 147 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 15 145 IPR005508 GO:0003677
Aed7g0096 147 Pfam B3 DNA binding domain 61 128 IPR003340 GO:0003677
Aed7g0096 147 PANTHER B3 DOMAIN PLANT PROTEIN 15 145 - -
Aed7g0096 147 Gene3D - 39 147 IPR015300 -
Aed7g0096 147 SUPERFAMILY DNA-binding pseudobarrel domain 63 132 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0096 Aed-Chr7 653328 653771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0096 34 145 B3 DNA Binding Superfamily AT4G03170 32.773 4.50e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aed7g0096 B3 6.2e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0096 - K00864 pvu:PHAVU_004G169500g 158.303