Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0091 ATGGCAGAGAGCTCATCGAAGGGTAAAAGCGTGGTTGAAGGCAAGAAAGCAATAAAGGAAATAGTATTTAACGACGAGTTGCAGCTGGAGTTCATAGTGAACGTGGGGATTGTGAAAGACTCAGAGTTGAGCATGCCATATAGGACCAAACTGAGCAATGACAAGTGGAACCTCTTCCTGCCAGTGCAAGGCTTCGAAGACATCCTCTTAGGGTTCTTGAAAGAATCCGTTGAAGATGTTAGAAAGGCTATCTCGGTTAACGTGTATGACAAAGGAGGCCACGAGTTTGATATGATGCTCAAGAAATGGGTCAAGGGTTCCAACAACTACTATGTTCTTAACCGAGGCTGGTTCAGTTTCTGCGACCAACAATGCTTGGGGGAGAACGATCTCATCGCCTTGCGCACATTTCGCCATGCAATAACTGATGCCTTATCCTTCGTTGTCACTTTCAAGAAGAAAAAATTATCCATCAGGTAA 480 0.4458 MAESSSKGKSVVEGKKAIKEIVFNDELQLEFIVNVGIVKDSELSMPYRTKLSNDKWNLFLPVQGFEDILLGFLKESVEDVRKAISVNVYDKGGHEFDMMLKKWVKGSNNYYVLNRGWFSFCDQQCLGENDLIALRTFRHAITDALSFVVTFKKKKLSIR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0091 159 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 26 154 IPR005508 GO:0003677
Aed7g0091 159 Pfam B3 DNA binding domain 72 136 IPR003340 GO:0003677
Aed7g0091 159 Gene3D - 41 157 IPR015300 -
Aed7g0091 159 ProSiteProfiles B3 DNA-binding domain profile. 86 155 IPR003340 GO:0003677
Aed7g0091 159 SUPERFAMILY DNA-binding pseudobarrel domain 56 150 IPR015300 -
Aed7g0091 159 CDD B3_DNA 81 153 IPR003340 GO:0003677
Aed7g0091 159 PANTHER B3 DOMAIN PLANT PROTEIN 26 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0091 Aed-Chr7 609931 610410 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aed7g0091 B3 2.6e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0091 - K06294 pvu:PHAVU_004G169500g 191.045