Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0090 ATGGCAGCAGAAAACAACAAAATTGTTGATGAACAACGTGAAGCTAGAAGAGTGCTGAAGTTCGTTTTCAACGTTGGAATAGTGAAAGAGTACGAGTTGAGTATGCCCTATAGGACACAAGTAACCGGTGACAAGTGGAACGTCTTCTTACGCGTGCCTAAGCTTGAAGCTATCCTTTTGGGGTTCTTGAAAGAAGGGGAAAATGTTAGAGACGGAATTCCAGTGAACGTGTACGACAAAGGTGGCCATGAGTTTGAAATGATGCTCAAGAAGTTAGAGAAGCATGGTTCCTCCAAAAGTTACTATGTGCTCAACCGAGGATGGTTCAGTTTCTGCGACCAACAGCGCTTGGGAGTGAACGATCTCATTGCCTTGCGCACCTTTCGCCATGCAACAACTGACAAGTTATCTTTCCTTATTACTTACATAAGAATCACCCGCAAAAAAATTAAGGCATGTCACTAA 465 0.4323 MAAENNKIVDEQREARRVLKFVFNVGIVKEYELSMPYRTQVTGDKWNVFLRVPKLEAILLGFLKEGENVRDGIPVNVYDKGGHEFEMMLKKLEKHGSSKSYYVLNRGWFSFCDQQRLGVNDLIALRTFRHATTDKLSFLITYIRITRKKIKACH 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0090 154 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 15 145 IPR005508 GO:0003677
Aed7g0090 154 SUPERFAMILY DNA-binding pseudobarrel domain 50 140 IPR015300 -
Aed7g0090 154 Gene3D - 42 154 IPR015300 -
Aed7g0090 154 PANTHER B3 DOMAIN PLANT PROTEIN 15 145 - -
Aed7g0090 154 Pfam B3 DNA binding domain 68 136 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0090 Aed-Chr7 608880 609377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0090 39 146 B3 DNA Binding Superfamily AT4G03170 29.358 1.92e-07 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aed7g0090 B3 1.2e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0090 - K14459 pvu:PHAVU_004G169500g 174.866