Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0087 ATGAGGGACCTCAGCAACGGTCAAGAAGCTATACCCATTCCAGTTTTTAGCCATGCTGATGATTCTCCTCCTATCACAGATATCACTTTTGTTTGTGAACTTGTTGGAATACTAAAGAAAAGTGAAGACTTAGATGATGCTTCACACAATGACTACATTATTGACATAGACTGCTGGGAGGCTTTAAAAGAGATGGGTGGAAAAAAGAAACGGATGCCTAACGAGCCATTGCCTGAAAAGATTTTCCTTGAGACAACAAAAAATGAGCAAGAGTTCTGTATAGATTGTAGTTCTTTTGGTAACGTGGCTAGGTTCATCAACCACAGTTGTGAACCTAACCTCTTTGTTCAATGTGTTTTGAACTCCCACTATGGACTCAAACAAGCTCGAATTGTACTATTTGCTGGAAGATTCATACCTCATAACCAAGAACTTACTTATGACTATGGTTACCAACTTGATAGTGTTGTTGATGCCAATGGGAAACTCAAGAAATCACCATGTTACTGTGGTGAAGCTACTTGTCGCAAGCACGTCAATGCGTTTGGTTTTATATCATGA 561 0.3939 MRDLSNGQEAIPIPVFSHADDSPPITDITFVCELVGILKKSEDLDDASHNDYIIDIDCWEALKEMGGKKKRMPNEPLPEKIFLETTKNEQEFCIDCSSFGNVARFINHSCEPNLFVQCVLNSHYGLKQARIVLFAGRFIPHNQELTYDYGYQLDSVVDANGKLKKSPCYCGEATCRKHVNAFGFIS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0087 186 ProSiteProfiles Post-SET domain profile. 164 180 IPR003616 -
Aed7g0087 186 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4-LIKE ISOFORM X1 30 178 - -
Aed7g0087 186 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 30 178 - -
Aed7g0087 186 Gene3D SET domain 24 179 IPR046341 -
Aed7g0087 186 ProSiteProfiles SET domain profile. 1 150 IPR001214 GO:0005515
Aed7g0087 186 SUPERFAMILY SET domain 29 177 IPR046341 -
Aed7g0087 186 Pfam SET domain 65 150 IPR001214 GO:0005515
Aed7g0087 186 SMART set_7 11 156 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0087 Aed-Chr7 595922 599809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0087 31 179 EF-hand Containing Proteins AT5G13960 50.000 1.55e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed7g0087 SET 5.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0087 - - gsj:114425719 254.603