Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0084 ATGGTCGAGCCAAGCACAGAATCATCAGACACAAACACCCCTTCTTCCTCCTCCTCTTCCTCCTCAACTTCTAAAAAACGACCCCGAGAGACCAACAACAACAACCATTCTGTCTATAGAGGTGTCCGAATGCGCACGTGGGGAAAATGGGTCTCTGAAATACGCGAGCCGCGTAAGAAGAACCGAATCTGGCTAGGAACCTTCGCCACCGCCGAGATGGCCGCGCGTGCGCACGACGTCGCGGCCCTCACTATAAAAGGCTCCTCTGCCATCCTTAACTTCCCCGAACTCGCCGCCTCGCTGCCCCGACCCGCCTCAAACTCCCCACGTGACGTGCAGGCCGCGGCCGCCAAGGCTGCCTCCATGGAAGCACCTCCGTCGCCGGCCGACACGGAAGAGGATGACCTGGGCGAGATAGTGGAGCTGCCGCCGCTGGGTACGAGTTTCGATTCGCCCGAACCGAGTAACGAGTTCGTTTTCCTCGACTCGCCCTATTCTCACCCATGGTATCACGGCATTTATGACGGTATTGTTGGCGACATCAACATGGTTTCAATGCTGCAGCAGCAGCAGCAAGAAGAGTCAGATCATAGCAGCATGCTTCTTTCCTTGTGGCCTTGA 621 0.5684 MVEPSTESSDTNTPSSSSSSSSTSKKRPRETNNNNHSVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALTIKGSSAILNFPELAASLPRPASNSPRDVQAAAAKAASMEAPPSPADTEEDDLGEIVELPPLGTSFDSPEPSNEFVFLDSPYSHPWYHGIYDGIVGDINMVSMLQQQQQEESDHSSMLLSLWP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0084 206 MobiDBLite consensus disorder prediction 1 40 - -
Aed7g0084 206 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Aed7g0084 206 CDD AP2 37 97 IPR001471 GO:0003700|GO:0006355
Aed7g0084 206 Pfam AP2 domain 37 87 IPR001471 GO:0003700|GO:0006355
Aed7g0084 206 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 8 126 - -
Aed7g0084 206 MobiDBLite consensus disorder prediction 102 134 - -
Aed7g0084 206 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Aed7g0084 206 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Aed7g0084 206 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Aed7g0084 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 126 - -
Aed7g0084 206 SUPERFAMILY DNA-binding domain 37 96 IPR016177 GO:0003677
Aed7g0084 206 Gene3D AP2/ERF domain 38 96 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0084 Aed-Chr7 582640 583260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0084 8 169 AP2-EREBP Transcription Factor Family AT5G11590 53.886 1.26e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed7g0084 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0084 K09286 - gmx:100804801 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0084 7 582640 583260 Aed7g0084 7 582640 583260 ECH
Aed5g2472 5 25938117 25938818 Aed7g0084 7 582640 583260 PCT