Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0072 ATGGGTTCTCCAAAAATGGATGATAGTGAGACACAAAAGGTAGAGATGGGAAGAAAAGAGAGAGGTTCCATAGGAACCATTTTGAGATATGCTGATTGGATTGATGTTGTGCTAATTCTAATGGGTGCTGTGGGAGCAATAGGAGATGGCATGTCCACAAATGTTTTGTTGCTGTTTGTTAGCCGTATCATGAACAGCTTAGGTGGTTACAGTACTAATAACCTACAAAGTGGCAAGACTTACATGGCTGAGGTTGAAAAGTGCACCTTATATTTTGTCTACTTGGGATTAGCAGCAATGGTGGTGGCTTTCATGGAAGGGTATTGCTGGAGCAAAACAAGTGAGAGGCAGGTGCTGAGAATTCGTTACAAGTACTTGGAAGCTGTCCTGAGACAAGAAGTAGGGTTTTTTGATTCGCAAGAAGCAACTACTTCTGAAATCATTAATAGCATATCAAAGGACACTTCTCTCATCCAAGAAGTTCTAAGTGAAAAGGTGCCCCTATTTTTAATGCACTCATCATCATTCATCTCTGGGGCTGCGTTTGCAACGTACTTCTCATGGAGGCTGGCTTTAGTAGCATTTCCAACGCTGGTTTTGCTGATAATCCCTGGCATGATATATGGGAAATACCTAATCTATTTGTCAAAGTCCACAGTGAAAGAATATGGGAAAGCAAACAGCATTGTAGAACAGGCACTTAGCTCAATCAAAACCGTTTATTCATTCACTGCAGAGAAGAGAATCATGGGGAGATATTCAGACATATTGTGTAGAACTTCAAGGCTTGGAATCAAACAAGGCATAGCAAAGGGCATTGCAGTAGGAAGCACAGGTCTATCTTTTGCAATATGGGCTTTTCTTGCTTGGTATGGAAGCCGTTTGGTTATGTACAAAGCTGAAAGCGGTGGAAGGATCTACGCTTCAGCCATTTCCTTCATAATGTGTGGACTATCTCTTGGAGTGGTGCTTCCTGATTTGAAGTACTTCACGGAAGCATCTGTTGCTGCTTCACGAATATTTGAGATGATTGACCGAACACCATTAATTGATGGTGAAGACACAAAAGGAGTTGTGCTAGAGAGCATTAGTGGCAGGCTAGACTTTGAGCATGTCAAATTCACATACCCTTCTCGTCCAGACATGGTTGTACTTAATGATTTCAATCTCCAAGTGGAAGCAGGGAAAACGGTTGCTCTAGTTGGTGCTAGTGGAAGTGGTAAGTCCACAGCAATAGCATTGGTGCAAAGATTTTATGATGCTAATGAAGGTGTTGTGAGGGTTGATGGTGTAGACATAAAAAGCCTACAGTTGAAATGGATTAGAGGGAAAATGGGTCTTGTAAGTCAAGAACATGCAATGTTTGGGACTTCCATTAAGGAGAATATTATGTTTGGGAAGCCTGATGCTACCATGGATGAAATTGTTGCTGCAGCCTCAGCAGCCAATGCTCACAACTTTATAAGGCAGCTTCCTCAAGGTTATGAAACCAAGATTGGAGAAAGAGGTGCACTTGTTTCAGGAGGACAAAAGCAACGGATAGCCATTGCAAGAGCCATCATAAAGAATCCTGTGATTCTCCTACTTGATGAAGCAACTAACCTCATAGCAGTTGTTAGTAGTGGTCGCATCATTGAAACAGGCACACACAATGAACTCATCAAGAGACCAAATGGCCACTATGCAAAACTGGCAAAACTACAGACACAAATGAGCATGGATGAGCAAGATCAAAATCCAGAACTAGGTCAAGGTGCTCTTTCTGCAGCAAGAAGCAGTGCAGGTAGACCAAGCACGGCCAGGTCAAGCCCTGCCATATTTCCAAAGTCACCACATGAAGCTACTTCTACTCCATCTCCAGTTTCTCACCCTCCACCTTCTTTTACAAGGCTTCTCTCTCTGAATTCTCCTGAATGGAAACAAGGTCTAATTGGAACCCTCTCAGCCATAGCCTTTGGCTCGGTTCAACCCCTATATGCTTTAACCATTGGGGGTATGATTTCTGCATTTTTTGCTGAAAGCCATCAAGAAATGAGGTACAGAATCAGGACTTATTCTTTTATTTTCTGTTCCCTTTCCCTTGCTTCTATCATCCTCAATCTCTTGCAACACTACTATTTTTCTTATATGGGAGCCAAGTTAACCAAAAGGATAAGACTTGGCATGCTGGAGAATATCTTAACCTTTGAAACTGCTTGGTTTGATGAGGAACAAAACTCCAGTGGAGCATTATGCTCAAGGTTAAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTAGCAGACAGACTCTCTTTACTAGTTCAAACCACTTCTGCTGTCACTATTGCAATGATCATAGGCCTTGCCGTAGCTTGGAAGCTTGCTCTTGTTATGATAGCAGTGCAACCACTCACAATCCTTTGCTTTTATACAAGAAAAGTGTTGCTCTCTACACTCTCAACAAAATTTGTTAAGGCACAGAATCAAAGTACACAAATTGCAGTGGAGGCAGTTTATAACCACAGAATTGTGACTTCATTTGGGAGCATTACAAAAGTTCTACGACTGTTTGATGAGGCACAAGAGGCGCCAAGGAAGGAGGCGAGGAAGAAGTCTTGGTTGGCTGGCATAGGAATGGGTTCTGCTCAGTGTCTAACTTTCATGTCATGGGCTTTGGATTTCTGGTATGGTGGTACTTTGGTGGAAAAAAGAGAAATATCAGCTGGGGATGTGTTCAAAACATTTTTTGTATTGGTGAGCACTGGCAAGGTAATAGCTGATGCTGGAAGCATGACTTCTGACCTTGCCAAGAGCTCAACAGCAGTGGCTTCTGTGTTTGAAATTCTTGACCGGAAATCACTAATTCCCAAGAGTGGAGATAACACTAACGGCATCAAGTTGGAAAAAATGAGTGGAACAATAGAGTTGAAGAATGTTGATTTTGCCTATCCAAGCAGGGCAGGGAGCCAAATTTTGCGCAAGTTTTGCTTGGAGGTGAAGGCAGGAAAAAGTGTTGGGCTGGTTGGAAAAAGTGGATGTGGAAAATCAACAGTGATTGCTTTAATTGAAAGATTCTATGATGTTGAGAGAGGTTCGGTTAAAGTAGACAACGTAGACATAAGGGAATTAGACATTCAGTGGTACAGACAGAACACGGCACTTGTTAGCCAAGAACCTGTGATATATTCTGGCAGCATACGTGACAACATTTTGTTTGGGAAGCAAGATGCAACAGAGAATGAAGTTGTGGAGGCTGCAAGAGCTGCCAATGCTCATGAATTCATATCATCATTGAAAGATGGATATGAAACTGAATGTGGAGAAAGAGGAGTGCAGCTATCAGGAGGGCAAAAGCAGAGAATAGCAATTGCAAGGGCCATAATACGCAACCCAAAGATACTACTTCTAGATGAAGCAACAAGTGCTTTGGACGTGCAATCAGAACAAGTTGTGCAAGAAGCACTCGATAGGACTATGGAAGGAAGAACCACGATTGTTGTGGCACATAGGCTTAACACCATCAAAGAGCTTGGTTCAATTGCTTATGTGTCTGAGGGAAAGGTCCTGGAGCAAGGAACCTATGCTCAACTTAGGAACAAGAGAGGTGCCTTCTTCAACCTTGCCAGCCATCAAATCCATACTTAG 3624 0.4252 MGSPKMDDSETQKVEMGRKERGSIGTILRYADWIDVVLILMGAVGAIGDGMSTNVLLLFVSRIMNSLGGYSTNNLQSGKTYMAEVEKCTLYFVYLGLAAMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSQEATTSEIINSISKDTSLIQEVLSEKVPLFLMHSSSFISGAAFATYFSWRLALVAFPTLVLLIIPGMIYGKYLIYLSKSTVKEYGKANSIVEQALSSIKTVYSFTAEKRIMGRYSDILCRTSRLGIKQGIAKGIAVGSTGLSFAIWAFLAWYGSRLVMYKAESGGRIYASAISFIMCGLSLGVVLPDLKYFTEASVAASRIFEMIDRTPLIDGEDTKGVVLESISGRLDFEHVKFTYPSRPDMVVLNDFNLQVEAGKTVALVGASGSGKSTAIALVQRFYDANEGVVRVDGVDIKSLQLKWIRGKMGLVSQEHAMFGTSIKENIMFGKPDATMDEIVAAASAANAHNFIRQLPQGYETKIGERGALVSGGQKQRIAIARAIIKNPVILLLDEATNLIAVVSSGRIIETGTHNELIKRPNGHYAKLAKLQTQMSMDEQDQNPELGQGALSAARSSAGRPSTARSSPAIFPKSPHEATSTPSPVSHPPPSFTRLLSLNSPEWKQGLIGTLSAIAFGSVQPLYALTIGGMISAFFAESHQEMRYRIRTYSFIFCSLSLASIILNLLQHYYFSYMGAKLTKRIRLGMLENILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRLSLLVQTTSAVTIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSTKFVKAQNQSTQIAVEAVYNHRIVTSFGSITKVLRLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVEKREISAGDVFKTFFVLVSTGKVIADAGSMTSDLAKSSTAVASVFEILDRKSLIPKSGDNTNGIKLEKMSGTIELKNVDFAYPSRAGSQILRKFCLEVKAGKSVGLVGKSGCGKSTVIALIERFYDVERGSVKVDNVDIRELDIQWYRQNTALVSQEPVIYSGSIRDNILFGKQDATENEVVEAARAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPKILLLDEATSALDVQSEQVVQEALDRTMEGRTTIVVAHRLNTIKELGSIAYVSEGKVLEQGTYAQLRNKRGAFFNLASHQIHT 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0072 1207 CDD ABC_6TM_Pgp_ABCB1_D2_like 632 948 - -
Aed7g0072 1207 Gene3D - 357 533 IPR027417 -
Aed7g0072 1207 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 534 1204 - -
Aed7g0072 1207 SUPERFAMILY ABC transporter transmembrane region 27 351 IPR036640 GO:0005524|GO:0016021
Aed7g0072 1207 MobiDBLite consensus disorder prediction 587 627 - -
Aed7g0072 1207 Pfam ABC transporter 988 1134 IPR003439 GO:0005524
Aed7g0072 1207 MobiDBLite consensus disorder prediction 587 617 - -
Aed7g0072 1207 Gene3D ABC transporter type 1, transmembrane domain 27 356 IPR036640 GO:0005524|GO:0016021
Aed7g0072 1207 Gene3D ABC transporter type 1, transmembrane domain 610 953 IPR036640 GO:0005524|GO:0016021
Aed7g0072 1207 SMART AAA_5 994 1186 IPR003593 -
Aed7g0072 1207 SMART AAA_5 394 612 IPR003593 -
Aed7g0072 1207 Pfam ABC transporter transmembrane region 644 913 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g0072 1207 Pfam ABC transporter transmembrane region 41 315 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g0072 1207 Gene3D - 957 1207 IPR027417 -
Aed7g0072 1207 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 643 930 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g0072 1207 Pfam ABC transporter 385 534 IPR003439 GO:0005524
Aed7g0072 1207 CDD ABC_MTABC3_MDL1_MDL2 967 1204 - -
Aed7g0072 1207 SUPERFAMILY ABC transporter transmembrane region 630 944 IPR036640 GO:0005524|GO:0016021
Aed7g0072 1207 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 29 534 - -
Aed7g0072 1207 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 332 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g0072 1207 ProSitePatterns ABC transporters family signature. 506 520 IPR017871 GO:0005524
Aed7g0072 1207 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 367 609 IPR003439 GO:0005524
Aed7g0072 1207 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 534 1204 IPR039421 -
Aed7g0072 1207 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 967 1203 IPR003439 GO:0005524
Aed7g0072 1207 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 340 - -
Aed7g0072 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 956 1204 IPR027417 -
Aed7g0072 1207 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 29 534 IPR039421 -
Aed7g0072 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 568 IPR027417 -
Aed7g0072 1207 ProSitePatterns ABC transporters family signature. 1106 1120 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0072 Aed-Chr7 465967 472758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0072 644 1193 Calmodulin-binding Proteins AT2G36910 38.768 1.33e-115 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0072 K05658 - gmx:100801088 2111.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0072 7 465967 472758 Aed7g0072 7 465967 472758 ECH