Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0066 ATGTGTGACCTCAAAAATCTCACACTTGTTAATTTCAGCAGGAATTCCATTCCCGGAGATTTCCCAACATTTCTCTATAAATGTTCCAAGCTGGTTTACCTCGACCTCCAAATGAACGACTTTGCTGGCAGCATTCCTGAAGATATAGACAACTTGGTTAACTTGCAGCATCTCAACCTTGGCTGCACCAGCTTCAGTGGTGACATCCCTGCAGGCATTGGAAGGTTAAAGCAACTGAGATTGCTTCAACTTCAGTATTGTCAATTCAATGGTACTTTCCCTGCTGAGAGTATTGGCAACTTGTTCAATCTTGAATTCTTGGACATTTCCTCTAACTTGGATCTCCCTCCTTCAAAGCTCTCATCAAGCTTGACCCGGTTGAAAAAACTGAAGTTCTTTCACATGTACAGTTCCAACCTGTTTGGGGAAATCCCTGAAACCATTGGAGAGATGGTAGCTCTGGAGAACTTGGATTTGTCACGAAGCAATTTAACTGGAAATATTCCTAAAGGCTTGTTCATGCTCAAGAATTTGAGCATACTGTACCTTTTCAAGAACAGGCTCTTTGGGGAGATACCTGGTGTGGTTGAAGCATTGAATTTGACCGCACTCGATCTTGCCGAGAACAATCTTGAGGGGGAAATACCTCATGATTTTGGAAAGCTCAAAAAGATTCCAACTGGGGTATCTTCATGGACTAATGTGATAGTGTTTAAAGCCAATGAGAACTACCTTAATGGAAGTATTCCAAAAGGGTTAACAAATCTTCCCAATTTAACAACTCTATTGCTTGATCACAACCAGCTCATAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTAGAGAATCTAAATTTGAGCCATAACCAACTCTCTGGACAAATCCCAGAGGCGATTGGTCGGTTACCTGTCCTTACCCAACTCGATCTGTCAGAAAATCAATTGTCTGGTCACGTTCCTTCTATACTTCCCAGACTCACCAATCTCAATCTATCCTCCAACCATTTGACAGGAAGGGTTCCAAGTGAATTTGAAAATTCTGTGTATTCCACCAGCTTTTTGGACAATTCTGGCCTCTGTGCTGATACTCCAGCACTGAACCTTAGGTTGTGCAGTGTTGGCTTTGAAAGGCCAACCAAAGGCTCTTCTCGAAAAAGGAAACAAGGATTTGACAACTCGTGGAAGCTCATTTCCTTTCAATGGCGAACTTTCAATGAATCAATTATAGTGTCATCAATGACAGAACAGAATGTTATTGGAAGTGGTGGATTTGGTACAGTATACCGTGTCCCGGTTGATGCTTTAGGCTATGTTGCTGTTAAAAAGATCTCCAAATATGTTAAAACAACACGAGTGAGTGAGAAGATTGATGTATTCAGCTTTGGAGTTGTACTATTGGAGCTGACAACTGGTAAAGAAGCTAGTTATGGTGATGAGTACTCATCTCTTGCAGAGTGGGCGTGGCAGCACATTATAGTAGGAAGCAAAATAGAAGAGGTGGTAGAGAATGAATTCATGGATCCAAGTTACAAGAATGAAATGTGCAGTGTTTTCAAGCTTGGAGTCTTGTGTACTTCAACACTTCCTGCTAATAGGCCTTCCATGAAGGAGGTGCTACACATATTGCTCAGCTGTAGTGAAGGACTTGCGTTTGGAGAGGGGAATCTTATTAGGCAATATGATGCTGTTCCCCTTCTTAAGAATTCCAAATGCTTGGATGCTGTTGATAATGATAGTGAATGA 1749 0.4168 MCDLKNLTLVNFSRNSIPGDFPTFLYKCSKLVYLDLQMNDFAGSIPEDIDNLVNLQHLNLGCTSFSGDIPAGIGRLKQLRLLQLQYCQFNGTFPAESIGNLFNLEFLDISSNLDLPPSKLSSSLTRLKKLKFFHMYSSNLFGEIPETIGEMVALENLDLSRSNLTGNIPKGLFMLKNLSILYLFKNRLFGEIPGVVEALNLTALDLAENNLEGEIPHDFGKLKKIPTGVSSWTNVIVFKANENYLNGSIPKGLTNLPNLTTLLLDHNQLIGPLPSDIISWKSLENLNLSHNQLSGQIPEAIGRLPVLTQLDLSENQLSGHVPSILPRLTNLNLSSNHLTGRVPSEFENSVYSTSFLDNSGLCADTPALNLRLCSVGFERPTKGSSRKRKQGFDNSWKLISFQWRTFNESIIVSSMTEQNVIGSGGFGTVYRVPVDALGYVAVKKISKYVKTTRVSEKIDVFSFGVVLLELTTGKEASYGDEYSSLAEWAWQHIIVGSKIEEVVENEFMDPSYKNEMCSVFKLGVLCTSTLPANRPSMKEVLHILLSCSEGLAFGEGNLIRQYDAVPLLKNSKCLDAVDNDSE 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0066 582 SUPERFAMILY L domain-like 199 351 - -
Aed7g0066 582 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 224 - -
Aed7g0066 582 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 224 385 - -
Aed7g0066 582 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 386 446 - -
Aed7g0066 582 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 224 - -
Aed7g0066 582 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 447 575 - -
Aed7g0066 582 SUPERFAMILY Protein kinase-like (PK-like) 451 542 IPR011009 -
Aed7g0066 582 Gene3D Ribonuclease Inhibitor 1 114 IPR032675 -
Aed7g0066 582 Pfam Leucine Rich Repeat 327 348 IPR001611 GO:0005515
Aed7g0066 582 Gene3D Ribonuclease Inhibitor 115 227 IPR032675 -
Aed7g0066 582 Gene3D Ribonuclease Inhibitor 228 369 IPR032675 -
Aed7g0066 582 SUPERFAMILY L domain-like 3 224 - -
Aed7g0066 582 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 386 446 - -
Aed7g0066 582 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 447 575 - -
Aed7g0066 582 PRINTS Leucine-rich repeat signature 325 338 - -
Aed7g0066 582 PRINTS Leucine-rich repeat signature 307 320 - -
Aed7g0066 582 Pfam Leucine rich repeat 280 317 IPR001611 GO:0005515
Aed7g0066 582 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 224 385 - -
Aed7g0066 582 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Aed7g0066 582 SMART LRR_typ_2 52 76 IPR003591 -
Aed7g0066 582 SMART LRR_typ_2 281 304 IPR003591 -
Aed7g0066 582 SMART LRR_typ_2 256 280 IPR003591 -
Aed7g0066 582 SMART LRR_typ_2 151 175 IPR003591 -
Aed7g0066 582 SMART LRR_typ_2 325 348 IPR003591 -
Aed7g0066 582 Gene3D Transferase(Phosphotransferase) domain 1 381 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0066 Aed-Chr7 430530 434009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0066 436 568 Receptor kinase-like Gene Family AT5G25930 45.865 1.71e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed7g0066 LRR_8 9.8e-07 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0066 - - gmx:100819744 413.305