Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0065 ATGTTTGACTCCAACTTGATTGGGGAGATCCCCGAAACCATTGGAAACATGGTGGCCTTGGAGAGATTGGATCTATCGCAAAACAATTTGAGTGGACCAATTCCCAGGGGTTTGTTCATGCTCAAGAGTCTGAGCATAATGTTTCTTTCAAGAAACATTCTTTCTGGGGTAATACCTGATGTGGTTGAAGCACTGAATTTGACAATCATTGATCTCACACGGAATGGTATCTCAGGAAAAATACCAGATGATTTTGGAAAGCTCCAAAAGTTAACAGGTTTGGCTTTGTCTCAGAATAAATTGCAAGGGGAGATACCACAAAGCATAGGCCGTCTCCCATCTGTGATGGATTTTCGTGTCTTTATAAATAACTTGTCAGGTACTCTTCCTCCGGACTTTGGCCGCTACTCAAACCTTAGAACCTTTCAGATTTCATCTAATAATTTTACTGGAAAGCTACCAGAGAACTTATGCTATAATGGTCACTTGCGTAATATATCTGTCTATGAAAATCATCTGAGTGGGGAGTTGCCACAATCACTTGGGAATTGTAGTAGCCTGATAGAACTGAAAATCTATAGCAATGAGTTTTCTGGTAGCATTCATAGTGGTCTTTGGACTTTCAACTTATCTAATTTCATGGTGAGTCATAATAAGTTCATTGGTGAGCTTCCTGAGAGATTGTCCTCAAGTATTTCGCGCTTGGAGATAGATCACAATCAATTTTCTGGTAGAATTCCAACTGGGGTATCTTCATGGACTAATGTTATCGTGTTTAAAGCCAATAAGAACTACCTTAATGGGAGTATTCCAAAAGAGTTAACAGCTCTACCTAAGCTAACAACTTTATTGCTTGATCAGAATCAACTCACAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTGGGGAATCTAAATTTGAGTCATAATCAACTCTCTGGACAAATCCCAGATGCGATTGGTCTGTTACCTGCCCTTGTCGTACTTGACCTGTCAGAAAATCAATTCTCTGGTCAAATTCCTTCTAAACTTCCCATACTCACCAATCTCAATCTATCCTCCAATTATTTGATAGGGAGGGTTCCAAGTGAATTTGACAATCCTGCTTATGACACCAGCTTTTTGAACAATTCTGGCCTCTGTGCTGATACCCCAGCACTGAACCTCACGTTGTGCAATTCTAGTTCTAGCCCTCAAGGGCAAAGCAAGGATTCATCTTTGTCTCTTGCTTTGATCATAAGCCTGGTGGTAGTGGCCTGCTTCCTGGCTTTGATTGCATCACTCTTGATCATCAGATTTTACAGAAAAAGAAAGCAAGGATTGGATAGATCATGGAAGCTCATTTCCTTCCAAAGGCTGAGTTTCACTGAATCAAATATAGTGTCATCATTGACAGAAAATAACATCATTGGCAGTGGTGGATATGGCGCAGTATACCGCGTTGCAGTTGATGGTTTAGGCTATGTTGCTGTGAAGAAGATTTGGGAAAACAAGAAGTTAGACAAGAATCTTGAGAGCTCGTTTCATACTGAAGTCAAGATATTGAGCAACATTCGTCACACAAACATTGTGAAGTTGATGTGCTGGGAACTTGCCACCATGTCATCTGTGATTGGTTCATTTGGCTATATGGCTCCAGGATTAGGAAGCAACATAGAAGAGGTGTTAGACAAGGAAGTGATGGAAACGAGTTACTTGGAAGGAATGTGTAAGGTTTTCAAACTGGGGATCATGTGTACTGCAACACTTCCTTCTAGTAGACCTTCCATGAAGGAGGTTCTGCGAGTATTGCTTTCTTTTGAAGATTCATTTTCCAAAGGAGAGACTAATACTAATGTTGTTGGCAACTATGATGATGTCCCCCTTCTTAAAAATTCAAAAAGGGAGCATATGTTGGATATTGATCATGATAGCTAG 1923 0.4041 MFDSNLIGEIPETIGNMVALERLDLSQNNLSGPIPRGLFMLKSLSIMFLSRNILSGVIPDVVEALNLTIIDLTRNGISGKIPDDFGKLQKLTGLALSQNKLQGEIPQSIGRLPSVMDFRVFINNLSGTLPPDFGRYSNLRTFQISSNNFTGKLPENLCYNGHLRNISVYENHLSGELPQSLGNCSSLIELKIYSNEFSGSIHSGLWTFNLSNFMVSHNKFIGELPERLSSSISRLEIDHNQFSGRIPTGVSSWTNVIVFKANKNYLNGSIPKELTALPKLTTLLLDQNQLTGPLPSDIISWKSLGNLNLSHNQLSGQIPDAIGLLPALVVLDLSENQFSGQIPSKLPILTNLNLSSNYLIGRVPSEFDNPAYDTSFLNNSGLCADTPALNLTLCNSSSSPQGQSKDSSLSLALIISLVVVACFLALIASLLIIRFYRKRKQGLDRSWKLISFQRLSFTESNIVSSLTENNIIGSGGYGAVYRVAVDGLGYVAVKKIWENKKLDKNLESSFHTEVKILSNIRHTNIVKLMCWELATMSSVIGSFGYMAPGLGSNIEEVLDKEVMETSYLEGMCKVFKLGIMCTATLPSSRPSMKEVLRVLLSFEDSFSKGETNTNVVGNYDDVPLLKNSKREHMLDIDHDS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0065 640 Pfam Leucine Rich Repeat 66 88 IPR001611 GO:0005515
Aed7g0065 640 SUPERFAMILY L domain-like 209 382 - -
Aed7g0065 640 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 550 633 - -
Aed7g0065 640 ProSiteProfiles Protein kinase domain profile. 466 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0065 640 ProSitePatterns Protein kinases ATP-binding region signature. 472 495 IPR017441 GO:0005524
Aed7g0065 640 Pfam Protein kinase domain 468 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0065 640 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 530 - -
Aed7g0065 640 Gene3D Ribonuclease Inhibitor 158 401 IPR032675 -
Aed7g0065 640 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 550 633 - -
Aed7g0065 640 SUPERFAMILY Protein kinase-like (PK-like) 456 598 IPR011009 -
Aed7g0065 640 SMART LRR_typ_2 17 41 IPR003591 -
Aed7g0065 640 SMART LRR_typ_2 325 349 IPR003591 -
Aed7g0065 640 SMART LRR_typ_2 277 301 IPR003591 -
Aed7g0065 640 SMART LRR_typ_2 88 112 IPR003591 -
Aed7g0065 640 ProSiteProfiles Leucine-rich repeat profile. 303 325 IPR001611 GO:0005515
Aed7g0065 640 Gene3D Phosphorylase Kinase; domain 1 443 539 - -
Aed7g0065 640 Gene3D Ribonuclease Inhibitor 1 157 IPR032675 -
Aed7g0065 640 SUPERFAMILY L domain-like 3 230 - -
Aed7g0065 640 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0065 Aed-Chr7 424472 426931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0065 532 599 Receptor kinase-like Gene Family AT5G25930 35.652 1.34e-10 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed7g0065 Pkinase 5.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0065 - - gmx:100798963 877.47