Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0060 ATGGGGAGAGCCACTAGGTGGGTGAAGAGTTTGTTTGGGATAAGAAAAGAGAAAGAGAAGAAGCAAAACTCCAAGTGTGGGGAGGCTAAAAGCATGGAATTGTGCTGTTCTGAGAGTACTAGTGATTCAAGAGTTTTGTGTCACAATCCAGGGACTATACCCCCCAACATTTCTCAAGCTGAGGCTGCTTGGATACAATCCTTCTACGCAGAGAAGGACCAGAACAAGCACGCCATTGCAGTTGCTGCTGCCACAGCAGCTGCGGCTGATGCTGCCGTGGCAGCAGCACAGGCTGCGGTGGCAGTTGTTAGGCTCACCAGCCAAGGAAGGGGTGGCACCATGTTTGGTTTTGGACATGAGATGTGGGCTGCCATCAAGATTCAAACAGTGTTTAGAGGGTACCTGGCAAGGAAGGCACTGAGGGCATTAAAAGGATTGGTGAAATTGCAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACCTTGCATAGTATGCAGGCTCTTGTTAGAGCTCAAGCTACAATTCGGTCCCACAAATGTCGCAGGCTCATGACCACAAAGAATGAACCATATAGATCTCAAAATAGAGCAAGAAAATCCATGGAGAGGTTTGATGACACTAAGATTGAGTATGCAGTTCCAAATCCAATCCACAGTAGGAGGGTATCATCTTCTTTTGATGCTACAATTAACAATAACAACAACAACAACAGTGTTGACGGGAGCCCCAAAATAGTGGAAGTAGACACTTTCAGGCCTAAATCAAGGTCTAGAAGGACAATATCAGATTTTGGTGACGAACCATACAGAACCCCTACACCTACACGTTTGTCCATACCAATAGCAGGCCAAAGGAATTTTGAGGACTCTGAATGGGGGTTAACAGGAGAAGAGTGCAGATTCTCTACAGCACAAAGTACTCCACGCTTCAGAAATACTTGTAGCTGTGGCTCAGTTGCACCTATGACACCAAACAGTGTGTGCACTGATAACTTGTTTCCAAACTACATGGCCAGTACCCAGTCTTTTAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAGCAACGGCCAGAACCAGCTGGTCCAAGGAAGAGGCTCTCCCTCAATGAAATGATGGAGTCTAGGAGTAGCTTGAGTGGTGTTAAAATGCAGAGGTCTTGCTCACAGGTTCAAGAAGTCATTAATTTCAAGAATGCTGTGATGGGGAAGCTTCAGAAATCCAATTCATAA 1242 0.4597 MGRATRWVKSLFGIRKEKEKKQNSKCGEAKSMELCCSESTSDSRVLCHNPGTIPPNISQAEAAWIQSFYAEKDQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGGTMFGFGHEMWAAIKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALVRAQATIRSHKCRRLMTTKNEPYRSQNRARKSMERFDDTKIEYAVPNPIHSRRVSSSFDATINNNNNNNSVDGSPKIVEVDTFRPKSRSRRTISDFGDEPYRTPTPTRLSIPIAGQRNFEDSEWGLTGEECRFSTAQSTPRFRNTCSCGSVAPMTPNSVCTDNLFPNYMASTQSFKAKLRSHSAPKQRPEPAGPRKRLSLNEMMESRSSLSGVKMQRSCSQVQEVINFKNAVMGKLQKSNS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0060 413 Pfam IQ calmodulin-binding motif 122 141 IPR000048 GO:0005515
Aed7g0060 413 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
Aed7g0060 413 Gene3D - 122 161 - -
Aed7g0060 413 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Aed7g0060 413 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Aed7g0060 413 MobiDBLite consensus disorder prediction 256 281 - -
Aed7g0060 413 SMART iq_5 142 163 IPR000048 GO:0005515
Aed7g0060 413 SMART iq_5 119 141 IPR000048 GO:0005515
Aed7g0060 413 Pfam Protein of unknown function (DUF4005) 311 386 IPR025064 -
Aed7g0060 413 MobiDBLite consensus disorder prediction 348 387 - -
Aed7g0060 413 ProSiteProfiles IQ motif profile. 168 197 IPR000048 GO:0005515
Aed7g0060 413 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 411 - -
Aed7g0060 413 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0060 Aed-Chr7 374155 376317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0060 1 387 IQD Protein Family AT3G16490 49.877 6.68e-94 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0060 - - gmx:100788710 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0060 7 374155 376317 Aed7g0060 7 374155 376317 ECH