Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0059 ATGTCAAACTTGCATTACATGTTCATCTTGTTAGCAGTTGTTGTTGTTCTTCTGCAAAATCCCAGTAGAATACATTGCCATACCAAGGGAATTAGACCAAGACGTTCTGCAGGTAAAGGGTTATCGACCAACGTGACTAAAGTGGAGTATTCTGAACAGCAATTCATGAAATGGGTGAATTTTGTTGGTTCCCTCAAACACTCAATTTTCAAGTCAGCTAAAAATAAGCTTGTGGCTTCTTACACTTTGCACGTTGATAAGGATCCTGGTGCTGGGGATTTTACCTCCATTCAAGAAGCCATTGATTCCCTTCCATTCATCAATCTTGTGAGAGTGGTCATAAAAGTCCAGGCAGGGGTCTACACGGAGAAAGTGAACATTCCTCCTTTGAAATCCTACATAACAATAGAAGGAGCTGCTGGTGCAGATAAAACCATTGTTAAATGGGGTGACACTGCTCAAACACCTGGCCCAAATGGGAGACCGCTAGGAACCTATGGTTCAGCAACTTTTGCTGTGAATTCACCTTATTTCATTGCCAAGAACATCACATTCCAAAACACAACTCCTGTTCCTACACCAGGAGCAGTTGGAAAGCAAGCGGTGGCATTAAGGATATCAGCAGACACAGCAGCATTTGTAGGGTGCAAATTCTTAGGAGCACAAGACACACTTTATGATCATTTGGGGAGGCATTACTATAAGGATTGTTACATTGAAGGCTCTGTTGATTTCATATTTGGCAACTCTCTATCACTATTTGAGGGATGTCACGTGCATGCCATAGCACAGAATACAGGGGCAGTAACAGCTCAAGGAAGGAGTAATATGTTGGAGGACACGGGGTTCTCATTTGTGAACTGTAAGGTCACGGGATCAGGAGCACTATACCTCGGTAGGGCTTGGGGACCCTTTTCTCGCGTGGTCTTTGCATACACATATATGGACAACATCATCATTCCCAAAGGCTGGTATAATTGGGGTGATCCTAACCGTGAAATGACTGTATTCTATGGGCAGTACAAATGCACAGGACTTGGAGCAAGCTTTGCAGGGAGAGTATCATGGTCAAGAGAACTCACTGACGAGGAAGCCATACCTTTTCTTTCACTTAGCTTTATTGATGGAACCGAATGGATCAAAGTGTAG 1149 0.4343 MSNLHYMFILLAVVVVLLQNPSRIHCHTKGIRPRRSAGKGLSTNVTKVEYSEQQFMKWVNFVGSLKHSIFKSAKNKLVASYTLHVDKDPGAGDFTSIQEAIDSLPFINLVRVVIKVQAGVYTEKVNIPPLKSYITIEGAAGADKTIVKWGDTAQTPGPNGRPLGTYGSATFAVNSPYFIAKNITFQNTTPVPTPGAVGKQAVALRISADTAAFVGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQNTGAVTAQGRSNMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGLGASFAGRVSWSRELTDEEAIPFLSLSFIDGTEWIKV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0059 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 381 - -
Aed7g0059 382 SUPERFAMILY Pectin lyase-like 78 381 IPR011050 -
Aed7g0059 382 Gene3D - 78 382 IPR012334 -
Aed7g0059 382 Pfam Pectinesterase 89 376 IPR000070 GO:0030599|GO:0042545
Aed7g0059 382 PANTHER PECTINESTERASE 6 381 - -
Aed7g0059 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0059 Aed-Chr7 363000 365488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0059 90 380 Carbohydrate Esterase AT5G47500 50.342 2.03e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0059 K01051 - gmx:100793314 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0059 7 363000 365488 Aed7g0059 7 363000 365488 ECH