Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0050 ATGAAGATGAAGATGAAGACGAAGACACCATTGAAGCAGCTGAAGCTCGCACCTTCAGATGGTAAGGAACTGGAATTTGACTTCTCACTGGATGACCTTGAGACCATCAAAGTAATTGGAAAGGGCAGTGGTGGTGTGGTACAACTTGTTCGCCATAAGTGGGTTGGAAGATTGTTTGCTTTAAAGGTTATTCAGATGAATATACAAGAGGATATTCGAAAACAGATTGTTCAGGAACTGAAAATAAATCAAGCATCACAGTGTCCACATGTTGTAGTTTGCTATCACTCATTCTATCATAATGGAGTAATATCTCTTGTGTTAGAATACATGGATCGTGGTTCTCTAGCAGATGTAATCAAACAAGTTAAAACAATTCTGGAACCATATCTTGCTGTGGTTTGTAAGCAGGTATTGCAAGGCCTTGTTTACCTGCATAATGAAAGACATGTAATACATAGGGACATTAAACCGTCCAATCTGTTAGTTAATCACAAAGGGGAGGTGAAGATTACTGATTTTGGTGTTAGTGCTATGCTGGCAAGCTCAATGGGCCAAAGAGATACATTTGTTGGAACTTACAATTACATGTCGCCAGAAAGAATCAGTGGGAGTACTTATGATTATAGCAGTGACATCTGGAGTTTGGGTATGGTAATGCTTGAGTGTGCCATAGGACGGTTTCCCTATATACAATCCGAAGATCAGCAAAGCTGGCCTAGTTTTTATGAGCTTCTTGCAGCAATAGTGGGGAGCCCCCCACCTTCTGCACCACCTGATCAGTTCTCCCCAGAGTTCTGTTCATTCGTGTCATCCTGCATCCAAAAGGATCCTCGGGATAGATTAACATCCTTGGAGCTTCTGGATCATTCTTTCATAAAAAAGTTTGAAGATAAAGATCTGGATCTTGGGATTTTGGTAGGTAGCTTAGAACCTCCTGTAAATTTTCCCAGATAA 957 0.4075 MKMKMKTKTPLKQLKLAPSDGKELEFDFSLDDLETIKVIGKGSGGVVQLVRHKWVGRLFALKVIQMNIQEDIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLADVIKQVKTILEPYLAVVCKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDYSSDIWSLGMVMLECAIGRFPYIQSEDQQSWPSFYELLAAIVGSPPPSAPPDQFSPEFCSFVSSCIQKDPRDRLTSLELLDHSFIKKFEDKDLDLGILVGSLEPPVNFPR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0050 318 SMART serkin_6 33 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0050 318 Pfam Protein kinase domain 34 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0050 318 ProSiteProfiles Protein kinase domain profile. 33 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0050 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Aed7g0050 318 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 17 317 - -
Aed7g0050 318 Gene3D Phosphorylase Kinase; domain 1 2 112 - -
Aed7g0050 318 Gene3D Transferase(Phosphotransferase) domain 1 114 307 - -
Aed7g0050 318 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 317 - -
Aed7g0050 318 SUPERFAMILY Protein kinase-like (PK-like) 30 308 IPR011009 -
Aed7g0050 318 CDD PKc_MAPKK_plant_like 31 297 - -
Aed7g0050 318 PIRSF ILK 1 292 - -
Aed7g0050 318 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0050 Aed-Chr7 285225 289513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0050 19 318 MAP Kinase Kinase Gene Family AT5G56580 86.379 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Aed7g0050 Pkinase 1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0050 K04368 - gmx:100786284 583.563