Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0047 ATGGAGAATAGCTGCATTCTGGCTTTTCTCCTCCTCATTCTCCTCCACTCAAGAACAACAAAAGCTGCCTTCAGTGTTGGTGTAGGTGTAGGTGTAGGTGTTGGTGTTGGCAGTGGTGGAGTGGTTTGGGTTGGAGGAGGGATTAACAATAACATCCCAGAGCCACCTAGATCTTCAGTGTCAAATCTTGAAGGAGCTTACACAGCACTTCAGGCATGGAAATCTGCAATCACTGAGGACCCTCTTAAGATTTTATCAAGTTGGGTTGGTCCTAATGTGTGTTCTTACAAAGGAGTCTTCTGTTCAAATGCAAACCCTCAAGATGAAATGGTTGTAGCAGGCATAGATCTCAACCATGCAAATCTGAAAGGAAGTCTTGTCAAGGAGATCTCTCTACTCAGTGATTTGTCTCTTCTCCACCTCAACACTAACAGATTCACTGGCACAGTTCCTGATACATTCAGAGAGCTGGTGTTTCTGGAAGAGTTAGACCTCAGCAACAACCAACTTTCAGGTCCTTTCCCTGCTTCTACTCTGTACATGCCAGCCCTCATCTACTTGGACCTCAGATTCAACTACTTCTCTGGGGCCCTCCCTCAGGAACTTTTCAGCAAGAACCTGGATGCATTATTCCTCAATAACAACCAATTTGAAGGTGAAATTCCCCAAAACCTGGGTAGTTCCCCAGCCTCAGTCATAAACTTAGCCAACAACAGGTTGAGTGGAACCATCCCAGCAAGTTTGGGCTTCATGGGTTCTAAAATAAAGGAGATTCTGTTCCTCAACAACCAGTTAACTGGTTGCATTCCTGAGGGAGTGGGGCTATTCACAGAGATGCAAGTTTTGGATGTGAGCTTCAACTCACTAATGGGTCATTTGCCAGACACACTATCATGCCTGCAAGACATAGAAGTTCTGAATTTGGCTCATAACAAGCTTTCTGGGGAGTTATCAGACATAGTGTGCTCATTGAGAAGCCTTGCAAATCTAACAGTTGCATACAATTTCTTTTCTGGGTTCAGCCAGCAATGCTCAAGGCTTTTCTTTAGGAATGTGGGTTTTGATTTCTCACTAAACTGCATTCCTGATAGGGACATGCAGAGACCTCCACCTGAGTGCTCTCCAATCCCAGGTGGTAGCCTTAGTTGTCTCAGAATCCCCACACCAGGGCCTCTTGTTTGTGGTGCTACTTCAATGGCTAACTCTAAGCACATTGATACCACTTCACCATAA 1233 0.4501 MENSCILAFLLLILLHSRTTKAAFSVGVGVGVGVGVGSGGVVWVGGGINNNIPEPPRSSVSNLEGAYTALQAWKSAITEDPLKILSSWVGPNVCSYKGVFCSNANPQDEMVVAGIDLNHANLKGSLVKEISLLSDLSLLHLNTNRFTGTVPDTFRELVFLEELDLSNNQLSGPFPASTLYMPALIYLDLRFNYFSGALPQELFSKNLDALFLNNNQFEGEIPQNLGSSPASVINLANNRLSGTIPASLGFMGSKIKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHLPDTLSCLQDIEVLNLAHNKLSGELSDIVCSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDFSLNCIPDRDMQRPPPECSPIPGGSLSCLRIPTPGPLVCGATSMANSKHIDTTSP 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0047 410 Gene3D Ribonuclease Inhibitor 228 351 IPR032675 -
Aed7g0047 410 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 409 - -
Aed7g0047 410 Gene3D Ribonuclease Inhibitor 66 227 IPR032675 -
Aed7g0047 410 Pfam Leucine rich repeat 136 193 IPR001611 GO:0005515
Aed7g0047 410 SUPERFAMILY L domain-like 66 346 - -
Aed7g0047 410 PANTHER LRR/EXTENSIN 1 409 - -
Aed7g0047 410 Pfam Leucine rich repeat N-terminal domain 67 102 IPR013210 -
Aed7g0047 410 PRINTS Leucine-rich repeat signature 160 173 - -
Aed7g0047 410 PRINTS Leucine-rich repeat signature 300 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0047 Aed-Chr7 276600 277832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0047 63 385 Leucine-rich Repeat extension Gene Families AT3G24480 49.697 2.30e-104 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0047 - - gsj:114407518 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0047 7 276600 277832 Aed7g0047 7 276600 277832 ECH