Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0046 ATGAGTAAGATGAGCAAGTTGAGTTCTGTAAGCAGTTCTGATCTCATAGATGCCAAGCTTGAAGAGCATCAATTGTGTGGATCCAAGCAGTGCCCCGGTTGCGGACACAAGTTTGAAGGGAAGCCGGACTGGCTAGGCCTGCCTGCAGGTGTGAAGTTTGATCCCACAGATCAAGAACTAATAGAACATCTTGAAGCCAAAGTGGAGGCAAAGAACATGAAATCACACCCTTTGATAGATGAGTTCATTCCCACTATTGAAGGAGAAGATGGAATTTGTTATACCCATCCGGAGAAACTTCCAGGTGTAACAAGAGATGGGTTGAGCAGGCACTTCTTCCATAGACCTTCAAAGGCTTACACAACTGGGACAAGAAAGAGGAGAAAGATTCAAAACGAATGTGACTTGCAAGGTGGAGAAACCCGGTGGCACAAGACTGGTAAGACCAGGCCAGTCATGGTGAATGGAAAACAAAAGGGTTGCAAGAAAATTCTTGTCCTCTACACCAACTTCGGAAAGAACAGAAAACCCGAGAAAACCAACTGGGTCATGCACCAATACCATTTGGGGCAGCATGAGGAAGAGAGAGAAGGAGAACTTGTGGTGTCAAAGATATTCTACCAGACACAGCCAAGGCAGTGCAATTGGTCAGAAAGAAGTACTGCAACAACTACTGGTGAAGGAAGTACTGGAGAACCTAATAACAACAACAACAGTGGAAGTGGAAGCTGTTCTTCTAAGGATATTCATGTTACTCACACTCACAGAGATGAGATGTCTTCAGTTGTTGGTGTTCCTCAAATCACAACTTTCACTCATCATCATCCCTTGGATATTCAACACCTCAAACCACCTGATCACTTTAGCTTCATCCCTTTCAGGAAAACCTTTGATGAGGTTGGAATAGGAGAGGCTTCAACAGTAGCAAGAGAAGAAGTGCATGAACAACAACAACATCATCAGATTTCAAACTCAGCTTTTCATATTAGTAGGCCTTCACATCCAATCTCTACCATTATCTCTCCTCCTCCCCTTCACCACACTTCCATCATTCTCGACGACAACAACTCTTACCATGTCTCTAGAATAATGCTCCAAAATGAAAATTTCCAGCAGCAGCAGCAACAACATCATAAGCTTGGAGGGAGGTCTGCATCTGGTTTGGAGGAACTCATCATGGGTTGCACTTCAACTGAAATCAAAGAGGAGTCATCCATCACAAACCCACAAGAAGCTGAATGGTTGAAGTACTCTTCTTATTGGCCAGACCCTGACAACCCGGATCATCATGGGTAG 1296 0.4421 MSKMSKLSSVSSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEREGELVVSKIFYQTQPRQCNWSERSTATTTGEGSTGEPNNNNNSGSGSCSSKDIHVTHTHRDEMSSVVGVPQITTFTHHHPLDIQHLKPPDHFSFIPFRKTFDEVGIGEASTVAREEVHEQQQHHQISNSAFHISRPSHPISTIISPPPLHHTSIILDDNNSYHVSRIMLQNENFQQQQQQHHKLGGRSASGLEELIMGCTSTEIKEESSITNPQEAEWLKYSSYWPDPDNPDHHG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0046 431 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Aed7g0046 431 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Aed7g0046 431 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 304 - -
Aed7g0046 431 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 314 422 - -
Aed7g0046 431 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Aed7g0046 431 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Aed7g0046 431 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 304 IPR044799 GO:0003700
Aed7g0046 431 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 314 422 IPR044799 GO:0003700
Aed7g0046 431 MobiDBLite consensus disorder prediction 213 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0046 Aed-Chr7 268204 273291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0046 11 428 NAC Transcription Factor Family AT5G56620 52.473 3.05e-132 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed7g0046 NAM 2.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0046 - - gmx:100795246 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0046 7 268204 273291 Aed7g0046 7 268204 273291 ECH