Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0040 ATGGCAAGTTCGATTGGGTGGATGCTGTTGCTCGTAACTTTAGTTCATGCACAGCAAAAAATAGGCTTCATAAGCATTGATTGCGGAGGTACTCCACCAAATGACCAGTACACAGATGAAACAACCAACATACAGTATACCACTGATAGAGGCTATATAGAAACTGGGGTTAATAAGAACATCTCCTCTGAGTATGCATACCCAAACAATCCCAATCTCCCACAACCACTCTCAGATCTCAGAAGTTTTCCTCAGGGACAAAGGAACTGTTACACCTTCAAAGCTTTACAAAGTGGCGATTTACATTTAATAAGGGCTTCCTTCTTGTATGGAAACTACGATGGTCAAAACAACCTACCTCACTTTGATCTCTATGTTGATGTCAATTTCTGGTCAACGGTCAATTTTAGAAATGCATCGGAGCAAGTTACAAAGGAAATCATTATCATGGCACAATCAGGGATCACAAGCGTTTGTCTTGTCAACAAGGGAGCAGGAACTCCTTTTATCTCTGGATTGGAACTTAGACCGCTTAATAGTTCCATTTATAACACTGAGTTTGGGGATTCTGCTTCGCTCTCACTTTTCAAACGATGGGACATTGGACCACTCAATGGAACTGGTAGATATGAGGATGATATTTATGATAGAATTTGGTCCCCCTTCAATTCTTCATCTTGGGATTCTGTCACCACTTCCACGCTAATAAATGTCAACGATGATGGCTATAGACCACCCTTTCAAGTCATTAGAACTGCTGCTACACCAAGGAATCCCACTCATAATACTTTGGATTTTTCTTGGACCCCAGATGATCCAAATTCCAAATTTTATGTCTACTTGTACTTTGCTGAACTGGAAAAGCTTCAGAAAACCCAACTCAGGAAATTCAATATATCTTGGAATGGATCTCCATTGTTTCATTCCATAGTACCACGCTACTTGTTTGCAACCACTCTTTCTAATTCAAAATCCTTGGTGGCAAATGAACATCGTATTTCTATTCAGAAAGCAAAGGATTCAACCCTTCCACCCATTCTTAATGCAGTTGAGATTTATGTAGAATATGAGCTCAAGCAGTTTGAATGGAACAATAACTTCTGCCATTTCCAGTCTCGCCTCGTTGGAATCTTTGTAAGTTCCGTTCCTAGCACTCTTTTAGAAAGATCAAGGGTTGGATTACTCACATTGAGGGTGGATGATCAAAATCTTGGTGACTCAGGAGGGAACAATAAAACCAAGAAAATTGTCATTCCCATAGTGGTATTAGTATCAGTTTTAGTTCTATTGGCTGTTTTCATTCTCTTTTGGAAACTTAGAAGAAATGAACGATCAGATGGAAATTCACATTGCTTGAGCTGGGAAAGGAGAATACAGATAGCAATCGATGCTGCAGAGGATGTGTTTGAACTTGAAGGGTTGGATTACCTACACCATGGATGCAAGCCTCCTATAGTACACAGGGATGTAAAGTCAGCCAACATTCTTTTAAGTGAAGACTTAGAAGCTAAGATAGCAGATTTTGGCCTCTCCAGGGAGTTTAGGAAAGATAACCAAAATCAACAATCTCAAGTGATTCATGATCATGATCATGATGATGCTACAAATGAAAAATCTGCAGTAATGGGCACAACAGGGTACCTTGACCCAGAGTAA 1656 0.3986 MASSIGWMLLLVTLVHAQQKIGFISIDCGGTPPNDQYTDETTNIQYTTDRGYIETGVNKNISSEYAYPNNPNLPQPLSDLRSFPQGQRNCYTFKALQSGDLHLIRASFLYGNYDGQNNLPHFDLYVDVNFWSTVNFRNASEQVTKEIIIMAQSGITSVCLVNKGAGTPFISGLELRPLNSSIYNTEFGDSASLSLFKRWDIGPLNGTGRYEDDIYDRIWSPFNSSSWDSVTTSTLINVNDDGYRPPFQVIRTAATPRNPTHNTLDFSWTPDDPNSKFYVYLYFAELEKLQKTQLRKFNISWNGSPLFHSIVPRYLFATTLSNSKSLVANEHRISIQKAKDSTLPPILNAVEIYVEYELKQFEWNNNFCHFQSRLVGIFVSSVPSTLLERSRVGLLTLRVDDQNLGDSGGNNKTKKIVIPIVVLVSVLVLLAVFILFWKLRRNERSDGNSHCLSWERRIQIAIDAAEDVFELEGLDYLHHGCKPPIVHRDVKSANILLSEDLEAKIADFGLSREFRKDNQNQQSQVIHDHDHDDATNEKSAVMGTTGYLDPE 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0040 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Aed7g0040 551 PANTHER BNAC07G41790D PROTEIN 378 444 - -
Aed7g0040 551 PANTHER BNAC07G41790D PROTEIN 445 551 - -
Aed7g0040 551 PANTHER BNAC07G41790D PROTEIN 11 361 - -
Aed7g0040 551 Pfam Protein kinase domain 471 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0040 551 MobiDBLite consensus disorder prediction 522 537 - -
Aed7g0040 551 ProSiteProfiles Protein kinase domain profile. 332 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0040 551 PANTHER OS07G0107800 PROTEIN-RELATED 378 444 - -
Aed7g0040 551 PANTHER OS07G0107800 PROTEIN-RELATED 445 551 - -
Aed7g0040 551 PANTHER OS07G0107800 PROTEIN-RELATED 11 361 - -
Aed7g0040 551 SUPERFAMILY Protein kinase-like (PK-like) 449 551 IPR011009 -
Aed7g0040 551 Pfam Malectin-like domain 26 353 IPR024788 -
Aed7g0040 551 MobiDBLite consensus disorder prediction 519 551 - -
Aed7g0040 551 Gene3D - 203 355 - -
Aed7g0040 551 Gene3D Transferase(Phosphotransferase) domain 1 438 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0040 Aed-Chr7 234360 238693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0040 445 551 Receptor kinase-like Gene Family AT4G29450 50.467 8.38e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aed7g0040 Malectin_like 2.7e-111 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0040 - - gmx:100793137 585.874