Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0011 ATGCACATTGGAATTCTTGCTGCGGCGGCTCATGCAGCTGCAAATAATAGCCCCTTCACTGTCTTTTATAATCCTAGGGCTAGTCCCTCAGAATTTGTTATTCCTTTAGCCAAGTACTACAAGTCAGTCTACAGCCACCAACCATCACTTGGCATGCGTTTCCGAATGATGTTTGAAACTGAAGACTCAGGAACAAGAAGGTATATGGGTACAATTACTGGTATCAGTGATCTAGATCCTGTGCGATGGAAAAACTCTCAATGGCGTAATTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGAGAAAAGCGTAGCAGGGTCTCAATCTGGGAAATTGAACCAGTGACTGCTCCATTTTTCATCTGCCCACCTCCGTTCTTTAGGTCCAAGAGGCCAAGACAACCTGGAATGCCTGATGATGAATTGTCTGATTTTGATAACATTTTCAAGCGGACAATGCCTTGGCTTGGTGATGATATGTGCATGAAGGATCCCCAAGGTCTCCCTGGCCTGAGCTTAGCTCAATGGATGAACATGCAGCAAAATCCTGCACTGGCTAGTTCATTGCAGCCAAATTATGCACCTTCCGTATCAGGGTCTATTTTGCAAAATATTCCTGGAGCTGATATTTCTCGTCAGCTGGGATTTTCTGCTTCACAAATTTCTCAGTCAAACAACGTAGCCTTCAATACTCAGAGGCTTCTTCAGACCGCTCAACAACTGGATCACCTTCAGAAGCTACCATCTACTACTAGCATATTGGGAACAGTCCTGCCGCCACAGCAGCAGTTGGGTGATATCACTCAGCAACCGAGGCAGAACATGGCAAATCAAACTATCCCTCAAGGTCAAGGTCAGGCCCAACTCTTGCATCCCCAGAACATTGCCCAAACCAACAATATTCTTCAACAGCAGCAACCATCCATTCAAAACCATCAACTCCATAAAAGCCTATCTCAGAACCCATCACAGCAGCAGCAGACAATAATTGGTCAGAATCAACAACAAAATTTGATCCAGTCCCCTATGCCTGATCATGTTCAACAATTACAGATGTCTGACAATCAGATTCAGTTGCAGTTGTTACAGAAGCTTCAACAACAAAAACAAACGCTCTTGGCTCAACAAACTGCATTGCAGCAGCCTACTCAACTTGCACAAATCCAGGATCAGCAAAGACAGCTTTTAGATAAAACACATAATTTGTCTAGAGCACTAATGCCTGGTCAAGTACTGGAAATTCCTCCTATACTTCAGAATTCACTCCCCGAGGCTAATTCTATCTCAAATCAGATGACAAAGGCCAATTGCCAGAACAATATTCAATTCTCTCAGCAGCCCAAGCTTCAACAGCAGCAACCTGGCTTGCTTTCTGAAATGTCTGGCCACATGATGACAATTCTCCCTACTCCTACAACTAACCAACTTTCTGCTATTGGCAGTAGTATGCTGACCGGAGCAGGTGGTAAAGGGCAATCTGTAATTACTGATGATGTTCCATCTTGCTCCACCTCACCTTCTACAAATAACTGTACCAATGCACTTCCACCATTGATAAATTCCCGATTTCAGAGAAGCACAATGGTTGGGGATGGCATGGCCCAGTCTACTGCAACAATCTTGAGTTCAAGTGCCTTAGAAACAATGTCATCAAATGCAAATTTGTTGAAAGATTTACAGCCAAAATCTGAAGTTAAGCCATCACTGAATATTTCCAAAAACCAGAATCAAGGGTATTTTGGTCCTCAGACATACTTGAATGGTAATGCTGGCCATACAGATTGTTTGGACACATCATCTTCTACAACATCAGTTTGCCTTTCTCAGAGTGATGCTCATATGCATCTGAATAACAATCCAATATCTTACAATCCACAGTCTATGTTGTTCAGAGACAATAGTCAAGATGGGGAAGTTCAGGCAGATGCTAGGAGCAATATTCCTTATGCCAATAACATTGATAGCCAAATGGGAATGCCACTGAATCCAGATTCCCTTTTAACCAAAGGCACATTGGGGTTGGGGAAGAATTTGTCTAATAATTTCTCTTCAGAAGGCATGCTTGGTAATTATGAAAATAACAGAGATGCTCAGCAGGAACTTTCGTCTTCAATGGTTTCACAGACATTTGGAGTCCCTGATATGGCCTTCAATTCAATTGATTCCACAATAGATGATAGTGACTTCTTGAATAGGGGTCCGTGGGCTCCACCATCAGCAGCACCACTGCCGCCACCTCTGCCCCCAGCACAGTTGCAGCGGATGAGGACATATACCAAGGTATACAAACGCGGAGCTGTGGGAAGGTCCATAGACATAACTCGGTATTCAGGTTACGAGGAGCTTAAACAGGATCTAGCTCGTAGGTTTGGCATAGAGGGACAGCTGGAAGATAGGCAAAGGATAGGTTGGAAACTTGTCTATGTAGATCATGAGAGTGATGTTCTACTAGTGGGAGATGACCCTTGGGAGGAGTTTGTGAACTGTGTCCGCTGTATTAAAATACTTTCTCCTCAAGAAGTGCAACAGATGAGCTTGGACGGAGATTTTGGCAATGGTGGCCTTCCAAATCAAGCCTGCAGCAGTTCTGACGGTGGGAATACTTAG 2607 0.4392 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGMPDDELSDFDNIFKRTMPWLGDDMCMKDPQGLPGLSLAQWMNMQQNPALASSLQPNYAPSVSGSILQNIPGADISRQLGFSASQISQSNNVAFNTQRLLQTAQQLDHLQKLPSTTSILGTVLPPQQQLGDITQQPRQNMANQTIPQGQGQAQLLHPQNIAQTNNILQQQQPSIQNHQLHKSLSQNPSQQQQTIIGQNQQQNLIQSPMPDHVQQLQMSDNQIQLQLLQKLQQQKQTLLAQQTALQQPTQLAQIQDQQRQLLDKTHNLSRALMPGQVLEIPPILQNSLPEANSISNQMTKANCQNNIQFSQQPKLQQQQPGLLSEMSGHMMTILPTPTTNQLSAIGSSMLTGAGGKGQSVITDDVPSCSTSPSTNNCTNALPPLINSRFQRSTMVGDGMAQSTATILSSSALETMSSNANLLKDLQPKSEVKPSLNISKNQNQGYFGPQTYLNGNAGHTDCLDTSSSTTSVCLSQSDAHMHLNNNPISYNPQSMLFRDNSQDGEVQADARSNIPYANNIDSQMGMPLNPDSLLTKGTLGLGKNLSNNFSSEGMLGNYENNRDAQQELSSSMVSQTFGVPDMAFNSIDSTIDDSDFLNRGPWAPPSAAPLPPPLPPAQLQRMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGGLPNQACSSSDGGNT 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0011 868 Pfam AUX/IAA family 755 841 IPR033389 -
Aed7g0011 868 ProSiteProfiles PB1 domain profile. 756 840 IPR000270 GO:0005515
Aed7g0011 868 Coils Coil 355 375 - -
Aed7g0011 868 Gene3D - 47 118 - -
Aed7g0011 868 SUPERFAMILY CAD & PB1 domains 769 834 - -
Aed7g0011 868 Gene3D - 751 845 - -
Aed7g0011 868 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 863 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed7g0011 868 MobiDBLite consensus disorder prediction 306 332 - -
Aed7g0011 868 PANTHER AUXIN RESPONSE FACTOR 1 863 - -
Aed7g0011 868 Pfam Auxin response factor 9 92 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0011 Aed-Chr7 110613 116403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0011 1 226 B3 DNA Binding Superfamily AT1G19220 68.559 1.81e-91 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0011 - - ccaj:109803454 1449.11