Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0003 ATGTTGGAAGGTGGTGCAAAATTCCCTGGAATAATAGACCTCAACAAACACAACGATAACTACTATGATTTCTCTCAAGGATTTTATCATAAGCTTGAGGAGGGCACCAATATGTCAATTGACAGCATTGGGAGCTTGCAAACAAGTAATGGTGGAGGATCTGTTGCAATGTCCATTGATAATAGCAGTGTTGGGTCCAATGATTCCCATACTCGCATATTGAACCACCAAGGGCTGCGGAGGCATGCCAATGATAATTACTCCATTGCACACAGTGTCAATCATCGAGGAAGAGTCACACACGCTTTGAGTGACGATGCTTTGGCTCAAGCTCTAATGGACAGCAGTTCCCCAACTGAGGGGCTTGACAATTTTGATGAGTGGACAATTGATTTGAGGAATCTTAGTATGGGTGAGGCTTTTGCTCAAGGAGCTTTTGGGAAACTCTACCGAGGTACCTACAATAATGAAGATGTTGCTATCAAAATCTTGGAGAGGCCTGAAAATGATCCAGCAAAGGCTCAGTTGATGGAACAACAGTTTCAGCAGGAAGTGATGATGCTGGCTACACTAAAGCATCCTAACATAGTTCGTTTTATTGGTGCATGCCGTAAACCAATGGTATGGTGTATCGTTACAGAATATGCCAAAGGGGGTTCAGTTCGGCAATTTTTGATGAAGCGTCAAAACCGATCAGTGCCCCTCAAACTGGCTGTCAAGCAAGCTTTGGATGTTGCACGGGGGATGGCATATGTTCATGGCCTTGGATTGATCCACAGGGACTTAAAATCTGATAATCTTTTGATTTTTAGTAACAAATCAATTAAAATTGCTGATTTTGGAGTTGCCCGGATTGAGGTGCAAACTGAAGGAATGACACCTGAGACTGGAACATACCGTTGGATGGCTCCGGAAAAAGATGATAATTTTGTGGGTGCTCGTGAGGTTGAAAGATATGTTACTGAACAAGATGGCCAGTGCTTCAATAGAGTTGTGCTTCGTCAAGTTGTAGCACTGCCATTCCGCCAATGCATTAAGACAGCTACTCAGATCAGCAGGGAACAACTACTCGGAATATCTGATAAAAGTGGAATAGACATGAGGAAATAG 1110 0.4315 MLEGGAKFPGIIDLNKHNDNYYDFSQGFYHKLEEGTNMSIDSIGSLQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLRRHANDNYSIAHSVNHRGRVTHALSDDALAQALMDSSSPTEGLDNFDEWTIDLRNLSMGEAFAQGAFGKLYRGTYNNEDVAIKILERPENDPAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFSNKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEKDDNFVGAREVERYVTEQDGQCFNRVVLRQVVALPFRQCIKTATQISREQLLGISDKSGIDMRK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0003 369 SUPERFAMILY Protein kinase-like (PK-like) 122 306 IPR011009 -
Aed7g0003 369 Pfam Protein tyrosine and serine/threonine kinase 136 306 IPR001245 GO:0004672|GO:0006468
Aed7g0003 369 SMART serkin_6 135 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0003 369 ProSiteProfiles Protein kinase domain profile. 135 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0003 369 PANTHER SERINE-THREONINE PROTEIN KINASE 2 310 - -
Aed7g0003 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Aed7g0003 369 Gene3D Phosphorylase Kinase; domain 1 126 210 - -
Aed7g0003 369 Gene3D Transferase(Phosphotransferase) domain 1 211 307 - -
Aed7g0003 369 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0003 Aed-Chr7 37027 39978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0003 15 306 MAP Kinase Kinase Kinase AT4G31170 75.168 1.09e-156 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed7g0003 PK_Tyr_Ser-Thr 4.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0003 - - gmx:100788536 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2397 5 25382295 25386395 Aed7g0003 7 37027 39978 PCT