Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2598 ATGGTTGGTAGCCTCTACACTCTACACCGGCCTGCAGTTCAGCTCAGTCAGCAATTGACGGAGATGAGTGATGTTTATAGCTATGGAGTTGATAACAGCAAAAAGACCAATAGAAGGTCAAGTAATCAGAGTGGTGAGGTTTTGAGCGAGCATCCATCTCAACTTCATAATGAGCAAAAGAATACCACCCTTTTGTCTCTTATGGATACCTGGAAGAACACCCCTCCTAATTGGGTGAGTTCAGATCCCTGTGATGATTGGGAGGGAATCAAGTGCAAGAATTCACACATTACATCAATAACATTATCAAGTGCTGGTTTGACTGGTCAGCTTTCTGGAGATATTGGATCACTATCTGAATTAGAGATTTTGGATCTATCTTACAACAAGGACATGACTGGACCACTTCCAGAATCCATTGGGGAATTGAAGAAGCTGTCTACCTTAATTCTTGTTGGTTGTGGCTTCAATGGTCCAATTCCAGAGAGCATAGGAAATCTGCAGGAGCTCCTCTTCTTATCTTTAAATTCCAATGGCTTTAGTGGAGAAATTCCGCATTCTATTGGTAATCTATCAAAGCTTTATTGGTTAGATTTAGCAGACAATGGACTTGAAGGGAGCATCCCGGTATCTAGTGGCGACATATCTGGTCTTGATAAGTTACACCATGCCAAGCATTTTCATCTTGGGAAGAATAATCTCTCAGGCAGTATTCCTCCTCAACTTTTTAGCGGTGAAATGGCTCTGATTCATGTGCTTTTGGAAAGCAATCAACTCACTGAAAACATTCCACCAACGCTTGGACTAGTTCAGAGTCTGGAAGTGGTGCGCTTAGATGGTAATTCATTAAGTGGACCTGTGCCTCCAAACATCAACAATCTTACGCATGTTCAAGAACTGTACTTGTCCAACAATAAACTGTCAGGCTCCCTGCCAAACCTTACTGGAATGGATGCCCTCAGCTACCTGGACATGAGCAACAATAGTTTTAAAGCATTGGATTTTCCAGAATGGTTTTCAACCCTCAAGTCCTTAACAACATTGTACGTCTTTCATTGCACACTTCTCTTCTGCTTTCAAGACTTACGTTTAGTTACACAGTTAGCTCTTGCTTTTCATGGCAGAAAGATGGAGAGAACACAACTTGAAGGACAGATTCCTACTTCTTTGTTTACACTTGTCAGTTTACAGACTGTGGTGCTAAAAGACAACAAAATAAACGGAACCTTGGATATCGGCTCCTCCTACAGCAATCAGCTGCGACTTGTTGATTTGGAGACTAATTCAATTGACAGCTTCGAGCAAAAAGATGTAGTTCCAAATGTCAAGATCAAGATAATACTTAAAGATAACCCAATTTGCCAAGAAAATAATGAAGTAGAAAGCTACTGCTCCTCTTCTGAACCCAATGTCTCATATTCAACACCACCAAATAATTGTCAACCTGGTACCTGCGGTTCAGAACAGGTTTCTAGTCCCAACTGTAAATGCGCATATCCATATTCGGGAATCTTAGCTTTCAGGTCACCTTCCTTTTCGGACTTTGATAATAAAACTCACTACTTAATGCTCGAAGAGGGTCTTATGCAGTCTTTTAAGTCCCATTTTCTACCTGTGGATTCGGTTTTGTTGAGCCATCCAAGTAAGGATTCAACTCAGTATCTCGAATTGAGCTTACAAGTCTTCCCATCAGGACAAGATCAATTCAATCGAACAGGGGCTTTTAGCATTGGTTTTCTGCTTAGTAACCAGACTTTTAAGCCTCCTAAAGTTTTTGGACCATTTTATTTTCTTGGAGATAAATATGAACACTTTGGGAACTTTGAAGGATTGACTGAATCGAGTAAATCTTCAAACATTGGAATCATAATTGGGGCAGCAGTTGGTGGTTCGGTTCTGCTACTGTCATTAATCCTAGCAGGTCTTTATGCTTTCCGCCAAAAGAAAAGGGCAGAAAAAGCCATTGATCAAAGCAATCCTTTTAGACGCTGGGATACAGTTGAGAGCAACAGTGGGGTCCCTCAGTTGAAAGAAGCAAGGATGTTTTCTTTTGAAGAGCTTAAAAAATACACCAAGAATTTTTCTCAAGTCAATGACATTGGATCTGGGGGCTTCGGGAAGGTTTATAAGGGAACCCTTCCCAATGGAAAAGTGATAGCAATAAAACGAGCTCAAAAAGAATCTATGCAGGGAAAGGTGGAGTTTAAAGCGGAGATTGAGCTCTTGTCAAGGGTCCACCATAAGAATCTTGTGAGTCTTTTGGGATTCTGCTTTGAACACGAAGAACAAATGCTGGTTTATGAGTATGTTCAAAATGGAAGTTTAAAGGACGCTCTCTCAGGGTTATATGGTCTTCATGGAATTGTTGACCCAGCCATTGGTTTGGAGTCCACACTTAGCGGTTTTGACAAGTTTGTGGATATGAGCATGGCATGTGTTGGAGACTCAGGTTCTGACAGGCCTAAGATGAGTGATGTGGTTAGAGAAATCGAAAATATTTTGAAGTCAGCTGGTGCAAACCCGAGTGAGGAATCACACTCACAATCACCCTCCATCTCTTCTTCTAGTTATGAGGAAGTCAGCAGAGGGAGTTCCAGCCATCCTTATAATAGCAATAGCAACGACACCTTTGACTTGAGTTCAGGACTTCCATATCCAAAACTTGACCCTAAGTAA 2676 0.4126 MVGSLYTLHRPAVQLSQQLTEMSDVYSYGVDNSKKTNRRSSNQSGEVLSEHPSQLHNEQKNTTLLSLMDTWKNTPPNWVSSDPCDDWEGIKCKNSHITSITLSSAGLTGQLSGDIGSLSELEILDLSYNKDMTGPLPESIGELKKLSTLILVGCGFNGPIPESIGNLQELLFLSLNSNGFSGEIPHSIGNLSKLYWLDLADNGLEGSIPVSSGDISGLDKLHHAKHFHLGKNNLSGSIPPQLFSGEMALIHVLLESNQLTENIPPTLGLVQSLEVVRLDGNSLSGPVPPNINNLTHVQELYLSNNKLSGSLPNLTGMDALSYLDMSNNSFKALDFPEWFSTLKSLTTLYVFHCTLLFCFQDLRLVTQLALAFHGRKMERTQLEGQIPTSLFTLVSLQTVVLKDNKINGTLDIGSSYSNQLRLVDLETNSIDSFEQKDVVPNVKIKIILKDNPICQENNEVESYCSSSEPNVSYSTPPNNCQPGTCGSEQVSSPNCKCAYPYSGILAFRSPSFSDFDNKTHYLMLEEGLMQSFKSHFLPVDSVLLSHPSKDSTQYLELSLQVFPSGQDQFNRTGAFSIGFLLSNQTFKPPKVFGPFYFLGDKYEHFGNFEGLTESSKSSNIGIIIGAAVGGSVLLLSLILAGLYAFRQKKRAEKAIDQSNPFRRWDTVESNSGVPQLKEARMFSFEELKKYTKNFSQVNDIGSGGFGKVYKGTLPNGKVIAIKRAQKESMQGKVEFKAEIELLSRVHHKNLVSLLGFCFEHEEQMLVYEYVQNGSLKDALSGLYGLHGIVDPAIGLESTLSGFDKFVDMSMACVGDSGSDRPKMSDVVREIENILKSAGANPSEESHSQSPSISSSSYEEVSRGSSSHPYNSNSNDTFDLSSGLPYPKLDPK 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2598 891 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 62 350 - -
Aed6g2598 891 Gene3D Ribonuclease Inhibitor 316 464 IPR032675 -
Aed6g2598 891 Gene3D Ribonuclease Inhibitor 53 214 IPR032675 -
Aed6g2598 891 SUPERFAMILY Outer arm dynein light chain 1 380 459 - -
Aed6g2598 891 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 787 859 - -
Aed6g2598 891 Gene3D Phosphorylase Kinase; domain 1 665 769 - -
Aed6g2598 891 SUPERFAMILY L domain-like 64 358 - -
Aed6g2598 891 ProSitePatterns Protein kinases ATP-binding region signature. 700 722 IPR017441 GO:0005524
Aed6g2598 891 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 377 785 - -
Aed6g2598 891 ProSiteProfiles Protein kinase domain profile. 694 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2598 891 MobiDBLite consensus disorder prediction 838 880 - -
Aed6g2598 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 62 350 - -
Aed6g2598 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 787 859 - -
Aed6g2598 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 377 785 - -
Aed6g2598 891 SUPERFAMILY Protein kinase-like (PK-like) 665 783 IPR011009 -
Aed6g2598 891 Pfam Protein tyrosine and serine/threonine kinase 697 780 IPR001245 GO:0004672|GO:0006468
Aed6g2598 891 Pfam Leucine Rich repeats (2 copies) 296 331 IPR025875 -
Aed6g2598 891 MobiDBLite consensus disorder prediction 30 58 - -
Aed6g2598 891 MobiDBLite consensus disorder prediction 835 891 - -
Aed6g2598 891 Gene3D Ribonuclease Inhibitor 215 315 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2598 Aed-Chr6 26917968 26924454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2598 53 785 Receptor kinase-like Gene Family AT1G79620 48.294 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Aed6g2598 PK_Tyr_Ser-Thr 1.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2598 - - gmx:100811702 1209.13