Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2588 ATGCGAGGATCAATTGACCGTGAGAAGGCAAGGGGCAAAATATTGGTTTGCCTTAGAGGTGTGAATGCAAGAGTGGAAAAGAGCCTGGTTGCTTTGGAGGCTGGTGCAGCTGGGATGATTCTTTGTAATGACGAGCTTAGTGGCAATGAGCTTATTGCTGATCCTCATCTCCTGCCTGCATCACAAATTAATTATGAAGATGGTCTTGCAGTCTATGCCTACATCAATTCAACCAGGAATCCGGTAGGATATATTGATCCACCGAAGACCAAGTTGCAGATAAAGCCTGCTCCAGTGATGGCAGCATTCTCCTCTAGAGGGCCGAACATGGTTACACCAGAGATCCTGAAGCCTGATGTGACTGCACCCGGTGTGAACATTATTGCTGCCTTCTCAGAAGGGGTTAGCCCAACAGGTATGAGCTTTGATAAGCGGAGGGTTCCTTTTATCACCATGTCTGGAACATCCATGTCTTGTCCTCATGTCGCCGGACTTGTTGGCCTTCTCAAGACTCTTCATCCTCACTGGAGTCCAGCTGTTATTAAATCTGCAATAATGACAAGTGCTAGGACAAGGGACAACACTGGTAAGCCAATGCTTGATGGGGATAATAATGTTAAGGCAACGCCATATGCCTATGGCTCTGGCCACATCAGACCAAACCGTGCCATGGATCCAGGGTTGGTCTATGACTTAACCACCAATGATTATCTAAACTTTCTTTGTATCTCGGGCTATAACCAGACCCAGATACGGCTCTTCTCTGCTACCGCTCATTATCGTTGTCCCGATACAATAAACAACATCCTGGATTTCAACTACCCTACAATAACAATACCAAAACTGTACGGGTCAGTTAGTTTGACACGGAGGCTGAAAAATGTTGGGTCACCAGCCACTTATACTGCAAGCCTCAAAGTACCAGCGGGTCTTTCCATGTCTGTGCATCCTAATGTCTTGAGATTTGACCACATTGGTGAAGAGAAGAGCTTTAAGTTGACAGTGAGTGTTACAAGACCAGGTGTGGCTACAGTATTTGGAGCTATAACTTGGTCAGATGGCGCCAAGCATCAAGTTAGGAGTCCAATTGTAGTTGGGGGAGTTAGAGGGTAG 1113 0.4627 MRGSIDREKARGKILVCLRGVNARVEKSLVALEAGAAGMILCNDELSGNELIADPHLLPASQINYEDGLAVYAYINSTRNPVGYIDPPKTKLQIKPAPVMAAFSSRGPNMVTPEILKPDVTAPGVNIIAAFSEGVSPTGMSFDKRRVPFITMSGTSMSCPHVAGLVGLLKTLHPHWSPAVIKSAIMTSARTRDNTGKPMLDGDNNVKATPYAYGSGHIRPNRAMDPGLVYDLTTNDYLNFLCISGYNQTQIRLFSATAHYRCPDTINNILDFNYPTITIPKLYGSVSLTRRLKNVGSPATYTASLKVPAGLSMSVHPNVLRFDHIGEEKSFKLTVSVTRPGVATVFGAITWSDGAKHQVRSPIVVGGVRG 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2588 370 PANTHER SUBTILISIN-LIKE PROTEASE 3 365 - -
Aed6g2588 370 Pfam Subtilase family 86 214 IPR000209 GO:0006508|GO:0008236
Aed6g2588 370 Gene3D Peptidase S8/S53 domain 93 237 IPR036852 GO:0004252|GO:0006508
Aed6g2588 370 Gene3D - 241 367 - -
Aed6g2588 370 Pfam PA domain 9 70 IPR003137 -
Aed6g2588 370 SUPERFAMILY PA domain 10 75 IPR046450 -
Aed6g2588 370 Pfam Fibronectin type-III domain 271 365 IPR041469 -
Aed6g2588 370 SUPERFAMILY Subtilisin-like 94 228 IPR036852 GO:0004252|GO:0006508
Aed6g2588 370 ProSiteProfiles Serine proteases, subtilase domain profile. 1 224 - -
Aed6g2588 370 ProSitePatterns Serine proteases, subtilase family, serine active site. 154 164 IPR023828 -
Aed6g2588 370 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 365 IPR045051 -
Aed6g2588 370 CDD PA_subtilisin_like 1 85 - -
Aed6g2588 370 Gene3D - 3 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2588 Aed-Chr6 26822200 26823312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2588 2 365 Subtilisin-like Serine Gene Family AT5G59810 59.946 7.07e-151 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2588 - - gmx:100794732 656.751