Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2564 ATGGGTGGTGATGAGAGTCGAGAATCATTGCTTTCAGAATCAAGAGATCATTCTAATCTCAATGAGACAAGTGACCTCCTCCAGATGAGAAGGCCTCAGCGTGGCAATTCTTCAGAGAAAGAGAACAACAACCTCCAAGGACAAAATTTGGTTCAAAACTCTTCACAGACTCAATTTATAGATTCAAAACAAAAAGCAGAATTCCAAGCGAAGGCAGTGTTCTTGTGGTTAGCTGCGTACCTAGGTGGAGGAACACTATGCTTCCTTCTCACAAGCGATCAGATAAAGGGCATCAAAACCTATGAGTTTCTTGATGCCATTTACTTCTGTGTGGTGACAATGACTACTGTTGGGTATGGAGATCTTGTGCCAGATAGCCATTTGGCAAAACTTCTTGCCTGCATTTATGTCTTCACAGGCATGGCTCTTATAGGCTTAATTCTTAGCAAGGCAGCAGATTACGTTGTTGAAAAGCAGGAAATATTTATAGTTAGAACCTTATTCAAGGGTAAAAATTTGGGTTCTGAACAGCTTTCCAAAGAGGTTCAAACTAACAAAGCCAAATATAAACTCATTCTGGCAGTATCCATCTTTTTGGTTCTTATGATTTCAGGGACTATTTTTCTCTATTTTATTGAAAGTCTAGAATTTCTTGATGCCTTCTATTGTGTTTGTTCCACAGTCACTACTTTAGGTTATGGGGATAAGAGCTTCTCGACTACTATTGGTCGTGCTTTTGCTGTGTTCTGGATTTTGAGCAGCACCATTTGCTTAGCTCAATCTTTTGCTTATCTTGCTGAATATTACACTGAAGAAAGACAAAAATCAATGGTAAAAATGGTTCTGGAACGAAAGTTGTCACTCCTTGATCTTGAGGCTGCTGATCTTGATGGAGACCATGTTGTCAGTGCCACAGAGTTCATATTATACAAGTTGAAGGAAATGGGAAAGATCAACCAAGAAGATATTTTAGTTGTGATGGATATTTTTAGAAAACTAGATTTTGATCAATCAGGAACTCTGACAGAAGCTGATCTCAACCATAGACCTGCCTAG 1056 0.3902 MGGDESRESLLSESRDHSNLNETSDLLQMRRPQRGNSSEKENNNLQGQNLVQNSSQTQFIDSKQKAEFQAKAVFLWLAAYLGGGTLCFLLTSDQIKGIKTYEFLDAIYFCVVTMTTVGYGDLVPDSHLAKLLACIYVFTGMALIGLILSKAADYVVEKQEIFIVRTLFKGKNLGSEQLSKEVQTNKAKYKLILAVSIFLVLMISGTIFLYFIESLEFLDAFYCVCSTVTTLGYGDKSFSTTIGRAFAVFWILSSTICLAQSFAYLAEYYTEERQKSMVKMVLERKLSLLDLEAADLDGDHVVSATEFILYKLKEMGKINQEDILVVMDIFRKLDFDQSGTLTEADLNHRPA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2564 351 ProSitePatterns EF-hand calcium-binding domain. 334 346 IPR018247 -
Aed6g2564 351 MobiDBLite consensus disorder prediction 1 20 - -
Aed6g2564 351 Pfam Ion channel 197 270 IPR013099 -
Aed6g2564 351 Pfam Ion channel 77 156 IPR013099 -
Aed6g2564 351 PRINTS Two pore domain K+ channel signature 229 238 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aed6g2564 351 PRINTS Two pore domain K+ channel signature 112 140 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aed6g2564 351 MobiDBLite consensus disorder prediction 1 48 - -
Aed6g2564 351 ProSiteProfiles EF-hand calcium-binding domain profile. 321 351 IPR002048 GO:0005509
Aed6g2564 351 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 19 346 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aed6g2564 351 MobiDBLite consensus disorder prediction 21 48 - -
Aed6g2564 351 ProSitePatterns EF-hand calcium-binding domain. 295 307 IPR018247 -
Aed6g2564 351 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 19 346 - -
Aed6g2564 351 Gene3D - 260 349 - -
Aed6g2564 351 Gene3D - 48 166 - -
Aed6g2564 351 SUPERFAMILY Voltage-gated potassium channels 71 157 - -
Aed6g2564 351 SUPERFAMILY Voltage-gated potassium channels 184 284 - -
Aed6g2564 351 Gene3D - 196 259 - -
Aed6g2564 351 SUPERFAMILY EF-hand 291 347 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2564 Aed-Chr6 26662673 26663824 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2564 71 346 Ion Channels AT5G55630 57.971 7.23e-113 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2564 K05389 - gmx:100799492 548.51