Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2557 ATGCAAACGTCTCGGAAGCACCCAAGTTCAGCTGGTTTTCATTTCTATCACCAGCCTGTGCAAGGCATTTACCAAATGTTGCAAAGCAATCTATGCCATGATAGCAGCAGCCAGGGAACTAGTGTTTCTTTTGAAACCTGCAAGGAGCAATACTTTACTCTAGAATCATGCCCAGCACCCACTACTGCTTTCATGGATTGTGATGATTCTCCTTCCTATGCAAGTACTACATCATCTAAAACGACTCCTTTTTCTCCACAAGGTTCTCAGTCATGCTATTCTGACAATACCTATGGTTCGCCAATAAGCGGCTTGTCTAGTGTTGATGACGGGCACGAACTGAAACACAAGCTTAGAGTACTGGAGAAGTCATTGTTGGGGCCTGAAGAATCAGACATTACAGACAATTGCGGTGTCAAGGGTGGCCTCCATAGAACATGTCAGTTGGCCAAACATAACTGGGATCAGATTGTAGAAAATATTCCACAATTTGATTTGAAAGGAGTCCTCATGGTTTGTGCACAGGCAGTGTCTGATGATGATATTCCAACAGCAAGAGGCTGGATGGAGAATGTATTGGGGAAAATGGTATCAGTCTCTGGAGATCCAATCCAGAGGTTGGGTGCTTACTTGTTGGAGGGGCTTATAGCAAGGTTGGAATCATCAGGGAATCTCATCTACAAATCCTTGAAGTGTGAACAACCAACAACAACAAGCCATGAACTAATGACTTACATGCAGATCCTCTACCAGATTTGCCCATACTGGAAGTTTGCATACATATCTGCAAATGTGGTCATTGAAGAAGCAATGGCAAATGAGTCTAGGATTCATATAATTGATTTCCAAATTGCTCAGGGCACACAGTGGCATTTACTTATCCAGGCTCTTGCACACAAGCCTGGGGGACCCCCCTCCCTTCGCGTGACCGGTGTTGATGACTCGCAGTCTATTCATGCACGTGGTGGAGGACTTCAGATTGTAGGACAAAGGCTTTCAAATTTTGCCAGGTCTTGTGGAGTTCCATTTGAATTCCACAGTGCTGCAATATCTGGTTGTGAGGTTGTACGAGGAAATATTGAAATTCGACCTGGGGAAGCTCTGGCTGTAAATTTTCCCTATGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACTGAGAATCATAGAGATAGATTGTTGAGGTTGGTTAAGAGCTTGTCTCCCAAGGTTGTTACCCTTATTGAGCAAGAATCCAACACCAACACATCCTCATTCTTTCACAGGTTTGTTGAGACCCTGGATTATTATACTGCAATGTTTGAATCCATAGATGTGGCTTGCCCCAGAGATGATAAGAAGCGGATTAGCGCAGAGCAGCACTGTGTGGCACGAGACATTGTCAACATGATAGCTTGTGAAGGGGTGGAGAGGGTGGAGAGGCATGAACTTTTGGGAAAGTGGAGGTCAAGACTTTCCATGGCTGGATTTAGACAATGTCAATTGAGTTCCTCAGTGATGGTTGCTACCCAAAATCTCCTAAAGGAGTTCAGTCAAAATTATAGGCTTGAACACAGAGATGATGGTGCTCTTTATCTTGGCTGGATGAACAGACATATGGCCACCTCTTCTGCTTGGAGGTGA 1623 0.4455 MQTSRKHPSSAGFHFYHQPVQGIYQMLQSNLCHDSSSQGTSVSFETCKEQYFTLESCPAPTTAFMDCDDSPSYASTTSSKTTPFSPQGSQSCYSDNTYGSPISGLSSVDDGHELKHKLRVLEKSLLGPEESDITDNCGVKGGLHRTCQLAKHNWDQIVENIPQFDLKGVLMVCAQAVSDDDIPTARGWMENVLGKMVSVSGDPIQRLGAYLLEGLIARLESSGNLIYKSLKCEQPTTTSHELMTYMQILYQICPYWKFAYISANVVIEEAMANESRIHIIDFQIAQGTQWHLLIQALAHKPGGPPSLRVTGVDDSQSIHARGGGLQIVGQRLSNFARSCGVPFEFHSAAISGCEVVRGNIEIRPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLIEQESNTNTSSFFHRFVETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRSRLSMAGFRQCQLSSSVMVATQNLLKEFSQNYRLEHRDDGALYLGWMNRHMATSSAWR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2557 540 ProSiteProfiles GRAS family profile. 157 540 IPR005202 -
Aed6g2557 540 Pfam GRAS domain family 168 540 IPR005202 -
Aed6g2557 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 539 IPR005202 -
Aed6g2557 540 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2557 Aed-Chr6 26634715 26636337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2557 1 540 GRAS Transcription Factor Family AT4G17230 58.135 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed6g2557 GRAS 9e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2557 - - gmx:100792931 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2557 6 26634715 26636337 Aed9g0764 9 5335145 5339332 PCT