Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2534 ATGAAGCTCGACAACTCTAACGGCCAGCCTCCTCTCTCCGCCGACGTTTCGCCGCCGCAGGATGACCAAGACGCCCAAGAGGAGATATTCGTGCCGCCGCTCAACTTCGCCATGGTTGACATCGGCATTTTTAGGTCCGGCTTTCCCGATTCTGCCAACTTTGGATTCCTTAAATCACTCCGTCTCCGTTCCGTAATGTGTTTGTGTCCTGAACCGTATCCAGAAACGACTTCAGAGTTTTTGAAGGCCAACGGAATAAGGCTTTATCAGTTCGGAATCGATGGCTGCAAGTTTGGAAAATTGATTCAAAATTTCAAATACCGTGAGCAGGAACCTTTTGTCAACATCCCAAACGATACAATTCGTGAAGCTTTGAAAGTAGCCCTGGATGTTAAGAATCACCCCCTGCTGATTCATTGTAAACGAGGGAAGCACCGCACTGGTTGTCTTGTGGGATGCATAAGAAGATTGCAGAGGTGGTGTCTATCATCTGTTTTTGATGAGTACCAAAGGTTTGCAGGTGCCAAAGCCAGAGTGTCGGACCAGAGGTTTATCGAATTGTTTGATATCTCTTGTTTGAAGCACCACCCACTGTCATTTTCATGCTGCAAGAAGTAG 618 0.4709 MKLDNSNGQPPLSADVSPPQDDQDAQEEIFVPPLNFAMVDIGIFRSGFPDSANFGFLKSLRLRSVMCLCPEPYPETTSEFLKANGIRLYQFGIDGCKFGKLIQNFKYREQEPFVNIPNDTIREALKVALDVKNHPLLIHCKRGKHRTGCLVGCIRRLQRWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKHHPLSFSCCKK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2534 205 MobiDBLite consensus disorder prediction 1 24 - -
Aed6g2534 205 Pfam Tyrosine phosphatase family 31 197 IPR004861 -
Aed6g2534 205 ProSiteProfiles Dual specificity protein phosphatase domain profile. 35 200 IPR020422 GO:0006470|GO:0008138
Aed6g2534 205 ProSitePatterns Tyrosine specific protein phosphatases active site. 138 148 IPR016130 GO:0016311|GO:0016791
Aed6g2534 205 PRINTS Plant and fungal dual specificity phosphatase signature 116 130 IPR020428 GO:0016791
Aed6g2534 205 PRINTS Plant and fungal dual specificity phosphatase signature 30 47 IPR020428 GO:0016791
Aed6g2534 205 PRINTS Plant and fungal dual specificity phosphatase signature 67 80 IPR020428 GO:0016791
Aed6g2534 205 PRINTS Plant and fungal dual specificity phosphatase signature 86 100 IPR020428 GO:0016791
Aed6g2534 205 PANTHER TYROSINE-PROTEIN PHOSPHATASE 17 203 - -
Aed6g2534 205 MobiDBLite consensus disorder prediction 1 20 - -
Aed6g2534 205 CDD PFA-DSP_Siw14 30 189 - -
Aed6g2534 205 Gene3D Protein tyrosine phosphatase superfamily 29 192 IPR029021 -
Aed6g2534 205 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 30 190 IPR029021 -
Aed6g2534 205 PANTHER - 17 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2534 Aed-Chr6 26525371 26533312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2534 19 205 Protein tyrosine phosphatase (PTP) family AT4G03960 65.445 1.42e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2534 K18045 - gmx:100785520 365.155