Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2531 ATGAACGGCAAGGCCTCAAAGAAGCTCCAACAACAAGAAAGAGGATGCAAGGCCTTGTGTTGCAGTTGCAGGTTCAGTGTTTCTTCCTCTGAAGAAGCAGAAAGCTCGGCCTCAGATAGGTTCCCTTCTGTTTCAAGCCTTGCACATGCGATGGTGCAAGAGAGGCTTGACCAAATGATCAGAGAAAGGATGGAAGTAGAGAGAAGAAGCTTAAGCAGAGAAGCCAGGACCAAGTTTGTTGTAATGATGGTGCCAATGGAGAAGAGGTCTTATGATCCAAGAGAGGATTTTAGGGACTCCATGATGGAGATGATAACTGCCAACCGCCTCCAAGATGCCAAAGATCTTCGTAGTCTTTTGAACTATTATATCTCCACCAATTCTGATGAGTACCATAGTCTTATCCTTCAGGTTTTTCATCAGATTTACAACTGCACCAGAGACAGTTATTTTTGTAAACCCAATGAATCATTGCTGATTGCCCCCAGTATTCTTTCCGGCAGAAGAGACATGGCTTGTCGGGTTAAGTTTTACTCACTTGCCCAAACACAAACAGAAAATTATCCAGAAATTGCTTGA 579 0.4352 MNGKASKKLQQQERGCKALCCSCRFSVSSSEEAESSASDRFPSVSSLAHAMVQERLDQMIRERMEVERRSLSREARTKFVVMMVPMEKRSYDPREDFRDSMMEMITANRLQDAKDLRSLLNYYISTNSDEYHSLILQVFHQIYNCTRDSYFCKPNESLLIAPSILSGRRDMACRVKFYSLAQTQTENYPEIA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2531 192 Coils Coil 49 69 - -
Aed6g2531 192 PANTHER TRANSCRIPTION REPRESSOR-RELATED 12 143 - -
Aed6g2531 192 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 86 142 IPR006458 -
Aed6g2531 192 ProSiteProfiles OVATE domain profile. 86 145 IPR006458 -
Aed6g2531 192 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 143 IPR038933 GO:0045892
Aed6g2531 192 Pfam Transcriptional repressor, ovate 90 143 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2531 Aed-Chr6 26514312 26515691 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed6g2531 Ovate 2.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2531 - - gmx:102663136 207.608