Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2524 ATGGAGGTTGCAGTCCCCAAACAACAACCGTCAAAAAATCAGCACAATGAGGATAATAAGATAGAGCTCTCGAGATACTCAAAAAATTGTGTAACTTTCCAGAGGAAAGCTGACAAAATTCCTGAGTATGGTCACAAGAAACCAGAACTAAAAGAGGAAGAAACTATGGGATGTTTAAAGAAAAATAACGCAGTAAGAGTGGAGGCTACGGTTACACAAGGAGAACAAGTAACTCAGCCTACTAAGGACAAAATCTTAAAATGCTCGAAAGGTTTTGGAACTACAAAGACGAGAAAGATTGAAGAAATTTATAAGCGTGATAATACAAAGCTGAAGTCATGCAAGAAAGGACATGAGACAGAGAAGCTTACTGTTTCAAACAAGAAAAGGAAATTTGACGATGATCTTTTGAATGATGATTTTGAAGATGAAGAAATGCTCATTCTTTTAAAGTCAAGGACCAGGAGAAGAAGAATGAATAATGTGATGGATGTTGGACAAAATCCCCGAAAATGTCATCAATGCATGAAAAAGGAGAGATTACTTTTTGTGCCTTGTACTAAATGCCCCAAAATGTACTGTATGGGATGTGTCAATAAATGGTACCCTGATATGTCAGCAGAAGAAATTGCTGCAAGCTGTCCATCTTGCCGGAAAAATTGCAATTGCAATGTTTGCTTGTGTTCAAGAGGAATGATTAAGACATCTAACAGGGAGATCAGTGATTATGAAAAAGCTCAGTATCTGCAATATCTGATGAACTTACTCCTTCCATTTTTGAAACAAATTTGTCTTGAACAAAGTCAAGAGGAGCAGATTGAAGCTAAATTACTAGGAAAATCTTCTTTTGAGATTGAGATACCCCAAAGTCTTTGTGGCGATGATGAACGTGTCTATTGCAGTGACCATTGTGCTACTTCAATTATTGACATTCATAGAAGCTGCCCCAATTGTTCCTATGAACTCTGCCTTAGTTGTTGCCAAGAAATACGTGATGGAAGCATTACACCCCGGGCTGAGCTGAAGTTCCCATATGTAAATAGGGGCTATGATTATATGCATGGTGGGGACCCTCTACCTGTGTTTTGTGATTTAGAGACATCAGAAGGTCATATTGAGCTGTCTACTGTGTGGAATGCTAAGAGTGATGGAAGCATTAGTTGTGCACCAAAGGAGTTGGGGGGTTGCGGCAGTGCTGTATTGGAGCTGAGACGCATCCTCCCAGATGGGCGGATATCTGACTTGGAAGCCAAAGCTCAAAATATGCTGAAAATTTGGGAAATTGAACACACAACTCTTAAGCAAAAAGAAGCAGTATCAAGCTACACCTCTTTGAGAAAGGAAGCTATTAGAGAAGGCATATATGCCAATAACACTAAAAAAGAAGGGCTGTTGCTTTTCCAAAAGCATTGGGCTAATGGTGAGCCAATTATAGTTCGTGATGTCCTTAAACAGGGAACAGGTCTGAGCTGGAAGCCAATGGTAATGTGGCGAGCATTATGTGAAAATATGGTTTCAGAAATCAGTTCAAAAATGTCAGAAGTGAAAGCCATCGATTGCCTAGCTAATTGTGAGGTAGAAATTGATAGTCACACATTCTTTAAAGGTTATTTAGAGCGAAGAACATACAGAAATCTCTGGCCAGAAATGCTCAAGCTAAAAGACTGGCCACCCTCTGATAAATTTGAAGATCTTTTGCCCCGCCATTATGACGAGTTTATTTGCTCCTTGCCATTTCAAGAGTACAGTGATCCTCGGGCTGGAATTCTCAATCTTGCTGTGACGTTGCCAGCCCATGTACTGAAACCTGACATGGGTCCAAAAACATATATTGCTTATGGGATTAAAGAAGAGCTTGGTAGAGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTGAATATTTTGACCCATACAGCAGAGGTGATATCAACTGATGAGCAGCACTTCATTATTTCAAAGTTGAAAGAAGCACACAAGGCACAAGATGAGAGAGAACAGTGTGCTCAAGAGAGGGTTGCTGATCACCTGAATGGTCGACCTTGCAAAGAGAACAAAGAATGTATAGAAAATAAGGATGTGTATGAAGCCAAAGGAATGAAGAGACAACCTATTGAAATTAATGGAAATATCTTTCCAAATAATGTACCTGAGGGGTTCACTTCTGCTACAGAGAATGAATCATTGGCAATTGGTAGTGCTCTATGGGATATATTTCGGAGAGAGGATTCTGAAAAGTTAGGAACATATCTTAGAAAACACTCAAAAGAATTTAGACACACTTACTGTTCTCCAGTTGAACAGGTTGTACATCCAATTCATGACCAATGTTTTTATTTGACATTGGAGCACAAGAAGAAGCTGAAGGAGGAGTTTGGTGTAGAACCATGGACTTTTGAACAAAAACTTGGGGAGGCAGTATTTATTCCTGCTGGATGCCCACATCAAGTCAGGAATCTCATGTCATGCACAAAAGTTGCTGTAGACTTTGTGTCCCCGGAAAATATCCATGAGTGTCTACGGTTAACTAATGAGTTCCGTCAGCTTCCGAAGAACCACAAGGCGAGAGAAGATAAGCTTGAGATAAAGAAGATTATAGTTTATGCCGTTGATCAAGCTGTGAAAGAATTAAAAGAATTACTAAAGTGTTCTTGA 2664 0.3964 MEVAVPKQQPSKNQHNEDNKIELSRYSKNCVTFQRKADKIPEYGHKKPELKEEETMGCLKKNNAVRVEATVTQGEQVTQPTKDKILKCSKGFGTTKTRKIEEIYKRDNTKLKSCKKGHETEKLTVSNKKRKFDDDLLNDDFEDEEMLILLKSRTRRRRMNNVMDVGQNPRKCHQCMKKERLLFVPCTKCPKMYCMGCVNKWYPDMSAEEIAASCPSCRKNCNCNVCLCSRGMIKTSNREISDYEKAQYLQYLMNLLLPFLKQICLEQSQEEQIEAKLLGKSSFEIEIPQSLCGDDERVYCSDHCATSIIDIHRSCPNCSYELCLSCCQEIRDGSITPRAELKFPYVNRGYDYMHGGDPLPVFCDLETSEGHIELSTVWNAKSDGSISCAPKELGGCGSAVLELRRILPDGRISDLEAKAQNMLKIWEIEHTTLKQKEAVSSYTSLRKEAIREGIYANNTKKEGLLLFQKHWANGEPIIVRDVLKQGTGLSWKPMVMWRALCENMVSEISSKMSEVKAIDCLANCEVEIDSHTFFKGYLERRTYRNLWPEMLKLKDWPPSDKFEDLLPRHYDEFICSLPFQEYSDPRAGILNLAVTLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVISTDEQHFIISKLKEAHKAQDEREQCAQERVADHLNGRPCKENKECIENKDVYEAKGMKRQPIEINGNIFPNNVPEGFTSATENESLAIGSALWDIFRREDSEKLGTYLRKHSKEFRHTYCSPVEQVVHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLMSCTKVAVDFVSPENIHECLRLTNEFRQLPKNHKAREDKLEIKKIIVYAVDQAVKELKELLKCS 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2524 887 CDD cupin_RmlC-like 774 822 - -
Aed6g2524 887 SUPERFAMILY Clavaminate synthase-like 466 881 - -
Aed6g2524 887 SMART cupin_9 566 850 IPR003347 -
Aed6g2524 887 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 18 886 - -
Aed6g2524 887 Pfam JmjC domain, hydroxylase 730 833 IPR003347 -
Aed6g2524 887 ProSiteProfiles Zinc finger RING-type profile. 172 218 IPR001841 -
Aed6g2524 887 MobiDBLite consensus disorder prediction 1 21 - -
Aed6g2524 887 ProSiteProfiles JmjC domain profile. 585 850 IPR003347 -
Aed6g2524 887 Gene3D Cupin 453 859 - -
Aed6g2524 887 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 886 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2524 Aed-Chr6 26458129 26464120 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed6g2524 JmjC 3e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2524 K15601 K21989 gmx:100797860 1579.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2524 6 26458129 26464120 Aed9g0716 9 4988374 4992473 PCT