Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2520 ATGTTCTCCGCTTTAGGATTTCCGGTCAACCTTAGCCCCGGCGCCACCGCTGATCACAATCGGACGGTCCTCGGCGAAGTTGACTTCCTCTCCGCTAGAAACAATTCATCACCTCAATCTCTTCACACCAACAACAACGATCATCCTAAATGTGATCCTCATGTAAATACTGGTTTGCAACTTCTCACCGCTAACGCTGGAAGTGATCAGTCAATGGTGGATGATGGGGCTTCATCGGATGCTCATGAAGATAAGCGTGCCAAGATCACCCAGCTGGCACAATTGCAAGAGGACCTTCGACGCGTGATTGAAGAGAACCAAAAGCTGAAGGTGATGCTCAGCCATGCCAGCAGTAACTACGAGAACTTGCAAATGCATCTTGCAGCATTACTGCAACAGCAAAAGAACCAACGGACTGAGAACACGGAGCAAGAGGTTGTTCAAGCAGGAAAAGCTGAGGAGAGAAACCATGGAGTTGTTGGAGGAACGGTGCCTAGACAATTCCTGGATTTAGTTCCAAGTGGTACGACCGAAATAGATGATCAAGTATCTAATTCTTCTTCTGGTGAAAGGACTCGATCAAGCACACCTCCAAGCAACAAAAACGACAAGGATAAGAAAGAGACTGATCCAGACTCTGAGAAATTGAACCCTTCCAACCCTACGGATCAATCCACCAGTCCGGAAGCCACTATGAGAAAAGCTCGTGTGTCAGTTCGTGCCCGATCAGAAGCACCCATGATCAGTGATGGGTGCCAATGGCGAAAATATGGACAAAAGATGGCTAAGGGAAACCCTTGTCCTCGAGCATACTACAGATGTACCATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCTGAGGACAGAGCAATTTTGACAACAACGTACGAAGGCACTCATAACCATCCACTGCCACCAGCTGCTATGAGCATGGCATCGACCACTGCAGCTGCGGCTAGCATGTTGTTGTCTGGGTCAATGTCGAGTGCTGATGGAATAATGAACTCCAATTTGCTGACCAGAGCTATTCTTCCTTGCTCTAACATGGCAACACTTTCAGCTTCAGCACCATTCCCCACAGTGACATTGGACCTCACACACAACCCAAACCCAAACGCGTTGCAGCAGTACCAAAGACCATCGCAGCCTCAGAACTTTGTCACGCCACCGCAACTGCCGCAACTCATTGCACAAGCGCTTTATAATCAATCCAAATTCTCAGGACTTCAACTTTCTCAGGATGTGGGGCCTAATAACTCCCAAGCTCCAAGACCGTTGTTTCAGCAAAGCCAACAGGTCTCGCTCACTGACACGGTCAGTGCCATCACCGCCGACCCAAACTTCACGGCAGCACTCGCCGCCGCTATCACCTCCATCATGGGCGGTGTTAATCCAACCAACAATAACAACAACAGCAGTAGCAATCCCAATGTCATCAATAGTTCTACAATCAGTGGCTTTTCAGGAAACTGA 1485 0.4869 MFSALGFPVNLSPGATADHNRTVLGEVDFLSARNNSSPQSLHTNNNDHPKCDPHVNTGLQLLTANAGSDQSMVDDGASSDAHEDKRAKITQLAQLQEDLRRVIEENQKLKVMLSHASSNYENLQMHLAALLQQQKNQRTENTEQEVVQAGKAEERNHGVVGGTVPRQFLDLVPSGTTEIDDQVSNSSSGERTRSSTPPSNKNDKDKKETDPDSEKLNPSNPTDQSTSPEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRAILTTTYEGTHNHPLPPAAMSMASTTAAAASMLLSGSMSSADGIMNSNLLTRAILPCSNMATLSASAPFPTVTLDLTHNPNPNALQQYQRPSQPQNFVTPPQLPQLIAQALYNQSKFSGLQLSQDVGPNNSQAPRPLFQQSQQVSLTDTVSAITADPNFTAALAAAITSIMGGVNPTNNNNNSSSNPNVINSSTISGFSGN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2520 494 MobiDBLite consensus disorder prediction 177 196 - -
Aed6g2520 494 MobiDBLite consensus disorder prediction 34 56 - -
Aed6g2520 494 SUPERFAMILY WRKY DNA-binding domain 241 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g2520 494 MobiDBLite consensus disorder prediction 215 232 - -
Aed6g2520 494 Coils Coil 85 140 - -
Aed6g2520 494 SMART WRKY_cls 248 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g2520 494 MobiDBLite consensus disorder prediction 135 242 - -
Aed6g2520 494 Gene3D WRKY domain 233 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g2520 494 ProSiteProfiles WRKY domain profile. 243 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g2520 494 PANTHER WRKY TRANSCRIPTION FACTOR 6 15 477 - -
Aed6g2520 494 MobiDBLite consensus disorder prediction 471 494 - -
Aed6g2520 494 MobiDBLite consensus disorder prediction 197 214 - -
Aed6g2520 494 Pfam WRKY DNA -binding domain 250 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g2520 494 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 477 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2520 Aed-Chr6 26430022 26433295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2520 3 468 WRKY Transcription Factor Family AT1G62300 53.502 6.12e-145 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed6g2520 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2520 - - gmx:100127382 700.279