Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2498 ATGGAGTTCGAAAAGAGAAAAGCAGCGATGGTAGCCTCACTGAGCTCATCAGAATCAGACAAATCTCCAAAGGGTTCATTAGACGTACCCATCATCCCTCTCATAAACACACTTAATCAAAACCCTTCTTACTTCACCACCAGCTCCTGCTCCGGCCGAATCTCAATCCTCTCCCAACCCCTCTCTCATCCCTCCACCCCTAAGAAGAAAGCCAGAGGCGGCACTTGGCTCTTCGTTTCCCACGACCCCGCCGATCCTGACTCGGTCCTCTCCCTCCTCTTCCCCTCCGAGTCAACTCACTCCCCCCTCGTCTCCGAACTCGTCTTCCGATTCGAGCCTCTCATCATTGCCCTCGAGTGCAGGAACCTCTCTTCTGCTCACTCCCTCGTTTCCCTCGCCATCTCATGTGGCTTCAGAGAGAGTGGCATTACCAATGCCAAAAAGCGCTTCATCATTGCCATTCGCTGCTCCATTCGCATGGAGGTCCCTTTGGGAGACACGCGCAACGTCATGGTCACGCCCGAGTATGTTCGTTACCTCGTTCAGGTCGCAAATGATAAAATGGAAGCCAATAGGATAAGAACCCAGAGGTTTTTCCAAGTTTTGCAGTCCAATGGATCTGTACTTGCTGATAACACTAACCATTTGTCGCCAACAAACCAAGTTTGCGATCATCTTGAACTAGAGGCTGAATCTCAATTGGAAAACGGGAATGTTGAAACATCTTCAGGGTTTGTGGGTTCTCCTGGTTGTGGTTTTTCAATTGGTCATTTCGAAATTGTTGGTGAACCAGTGGAGAAGCTTTTCCTTTGGGGTCACTCGGCTTGTGGACTGGGTGATGCTGACCACAAGAAAGTTATTGTATTTGGTGGCTTTGGAGGCATGGGGAGACATGCAAGGAGAAATGATTTGTTGCTGCTTGATCCATATTCTGGTAATCTTGATATGGTTAGCACTGCTGACTGTGCTTCTCCATCTCCACGTTTGGGTCATTCAGCTTCCTTGGTTGGAGATCGCATGTTTGTGATTGGAGGTCGGACTGGTCCTGATAAAATTCTGAATGATGTCTGGATCCTCGATACAACTAAGAATTCTTGGAAGTTACTGCAATGTGGTGACAATGTATTTCCTCCCAGGCATCGTCATGCTGCAGCAGTCATGGGTTCAAACATTTATGTATTTGGTGGGCTTGATAATGATATTATCTTTTCTTCCTTTTATGTTTTTGACACAAACAATTTACACTGGAAAGAAATACCAATTTCTGGGGACTGGCCATGTGCACGCCACTCACATGCTATGGTGGCATCTGAGTCTCAGATTTTCATGTTTGGTGGATACAATTCTGGTAAAGCACTTGGGGATTTGTATAGCTTTGATGTTCAGAATAGTCAATGGACAAAGGAAAGGACAGCTGGAAGGAATCCACATGCTAGGTTCTCCCACTCAATTTTTGTCTATAAGAATTATCTTGGAGTTCTTGGTGGTTGTCCTGTTAGACAACATTGTCATGAGCTGGCTTTACTTGATTTGAAGCTTCGTTTATGGAAGCATGTTACCCTCAATTCTGTAGGTAAAGATTTGTTTGTGCGTAGTACAGCCAATGTCGTGGGTGATGATCTTGTTGTAGTTGGTGGTGGTGCATCATGCTATGCTTTTGGAACCAAGTTCAGCGAGCCAGCAAAAGTCAGCTTGCTCCATCTAATGCATTCACATGATGAACCAGAAAAAAATCAAAGAAAGCATATAATTAACCAAAATGAAGGGACAAACAGGAAGAACATTGAAAATTCTTATGGACCTCAACTTGAACATGCACCAAATATATCTGAAGATGAAATTTCACATTTTAATGATAAGTTACCTTGCTTGAATGATCAAAGTCAGATGATTGCATTGCATTATGTTTTGCAACTAGAAAAGAAATATGCAAAATTGGGGAAGGATATATTGAAGAAATTTGGATGGTTAGACTTGGGGAGGAAAGCATACTCAGATGAGGGTGGAGTACATATCTATTTTCCTGTCCATCAAGAATTTTTTGCTGTGTTTCATGAAAGGAATCATCATTTGGGAGATACATTTGATGGGAAAAATGAAGGTCCCTTTTCAAAACCACTTAAACAAGACGAATTCTTATTAAATGAGTTATCCTTTTCTGAAGCATTGATACTTCTCCATGAATATGGTGCCATTGTGTTGGGAGACAAGGTTGCTGAAGAAAGAAAAGCATCCAAATCTCCTTTGACAGTGATGACTGAAGCAATAACATCTTTGATTGAGCATAAGGGCCTACCAACACAGCTTCTAGAGGAACTGCCAACAAGATGGGATCGGCTTGGAGATGTTGTTTTACTTCCAAATACTTCTTTTAAGGATTCCATGTGGGACTCCATTGCAGAAGAGCTTTGGTCCATTATTGCCAAATCACTCAAGGCTCACCGTCTAGCTCGCCAAGGCCCAGTTGCTGCGACTGGTACAAGAGATAGCACATTGCAGATTCTTGTTGGAGATAATGGCTGGGTCAATCATCGAGAAAATGGAATACTCTATTCTTTTGATGCTACAAAATGTATGTTTTCATGGGGTAATCTTTCTGAGAAGCTCCGGATGGCCAAGCTAGATTGTAAAGATGAGGTTGTAGTAGACCTGTTTGCAGGCATTGGCTACTTTGTGCTGCCTTTCCTTGTCAGGAGAGAGGGTGGAATATTACATGTCCATGGGAATACGAAAGACTCAGAGGAGAGTCAGTGGATTGATCATGTATCACAATCAATATATGACATTGCTAGATCTGAAGGTTATTGTTGGGAGGTTTCTATAGAACATGTTGAGAGGGTAAAATGGGACTTCCACCTGGCGTTTATGGAGTCCATCCATTATCCATTAGTGAGTGTCGGTAGAGGCTTGCTTGCATGGATCCACACGGAGCCAACTTCAGGCTCAGCCATCAAGCTTTCTTCAAGGTCACCACTGTCACTGAGTCCTTCTCTTGCTGGGCAAGGGCAAGGGCAAGGGCAAGACAATGGGCTTGTTATGAACTTCTACAAGGAATCATGCCCTCAGGCTGAAGACATCATCAAAGAACAAGTGAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCCTGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAGGTAGGAGGTCCCCATATCCCTCTGAAAACTGGAAGAAGGGATGGTAGAAGGAGCAGAGCTGATGTGGTTGAGCAGTTCCTCCCAGACCACAATGAGTCAATTTCTGCGGTTCTTGACAAGTTTGGTTCGATGGGAATTGACACACCCGGAGTGGTTGCCTTGCTTGGATCACACAGTGTTGGTCGAACCCACTGTGTCAAGTTGGTGCACCGTTTGTACCCAGAGATTGATCCAACTCTCAACCCTGACCACGTGCCTCACATGCTTAAGAAGTGCCCAGATGCTATTCCAGGCCCTAAGGCGGTGCAGTACGTGAGAAACGACCGTGGCACCCCCATGATTCTTGACAACAACTACTACAGGAACATATTGGACAACAAGGGTCTTTTGATAGTGGATCACCAACTAGCCAATGACAAGAGGACCAAGCCTTATGTTAAGAAAATGGCAAAGAGCCAAGACTATTTCTTCAAGGAGTTTTCTAGAGCCATTACCTTGCTCTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGAAAGCAGTGCAATCTTGCCAACAAGCACCCTTAA 3744 0.445 MEFEKRKAAMVASLSSSESDKSPKGSLDVPIIPLINTLNQNPSYFTTSSCSGRISILSQPLSHPSTPKKKARGGTWLFVSHDPADPDSVLSLLFPSESTHSPLVSELVFRFEPLIIALECRNLSSAHSLVSLAISCGFRESGITNAKKRFIIAIRCSIRMEVPLGDTRNVMVTPEYVRYLVQVANDKMEANRIRTQRFFQVLQSNGSVLADNTNHLSPTNQVCDHLELEAESQLENGNVETSSGFVGSPGCGFSIGHFEIVGEPVEKLFLWGHSACGLGDADHKKVIVFGGFGGMGRHARRNDLLLLDPYSGNLDMVSTADCASPSPRLGHSASLVGDRMFVIGGRTGPDKILNDVWILDTTKNSWKLLQCGDNVFPPRHRHAAAVMGSNIYVFGGLDNDIIFSSFYVFDTNNLHWKEIPISGDWPCARHSHAMVASESQIFMFGGYNSGKALGDLYSFDVQNSQWTKERTAGRNPHARFSHSIFVYKNYLGVLGGCPVRQHCHELALLDLKLRLWKHVTLNSVGKDLFVRSTANVVGDDLVVVGGGASCYAFGTKFSEPAKVSLLHLMHSHDEPEKNQRKHIINQNEGTNRKNIENSYGPQLEHAPNISEDEISHFNDKLPCLNDQSQMIALHYVLQLEKKYAKLGKDILKKFGWLDLGRKAYSDEGGVHIYFPVHQEFFAVFHERNHHLGDTFDGKNEGPFSKPLKQDEFLLNELSFSEALILLHEYGAIVLGDKVAEERKASKSPLTVMTEAITSLIEHKGLPTQLLEELPTRWDRLGDVVLLPNTSFKDSMWDSIAEELWSIIAKSLKAHRLARQGPVAATGTRDSTLQILVGDNGWVNHRENGILYSFDATKCMFSWGNLSEKLRMAKLDCKDEVVVDLFAGIGYFVLPFLVRREGGILHVHGNTKDSEESQWIDHVSQSIYDIARSEGYCWEVSIEHVERVKWDFHLAFMESIHYPLVSVGRGLLAWIHTEPTSGSAIKLSSRSPLSLSPSLAGQGQGQGQDNGLVMNFYKESCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQVGGPHIPLKTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGSMGIDTPGVVALLGSHSVGRTHCVKLVHRLYPEIDPTLNPDHVPHMLKKCPDAIPGPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNLANKHP 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2498 1247 Pfam Galactose oxidase, central domain 428 468 - -
Aed6g2498 1247 Pfam Galactose oxidase, central domain 327 369 - -
Aed6g2498 1247 Pfam Peroxidase 1057 1208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2498 1247 ProSiteProfiles Plant heme peroxidase family profile. 1010 1051 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2498 1247 SUPERFAMILY SSo0622-like 1 203 IPR036602 -
Aed6g2498 1247 Pfam Met-10+ like-protein 776 897 IPR030382 -
Aed6g2498 1247 PRINTS Plant ascorbate peroxidase signature 1100 1121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed6g2498 1247 PRINTS Plant ascorbate peroxidase signature 1058 1070 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed6g2498 1247 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 777 909 IPR030382 -
Aed6g2498 1247 Pfam Methyltransferase TYW3 5 203 IPR003827 -
Aed6g2498 1247 SUPERFAMILY Kelch motif 285 548 IPR015915 GO:0005515
Aed6g2498 1247 Pfam Kelch motif 378 420 IPR006652 GO:0005515
Aed6g2498 1247 Gene3D - 1011 1056 - -
Aed6g2498 1247 SUPERFAMILY Heme-dependent peroxidases 1011 1244 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed6g2498 1247 Gene3D - 403 565 IPR015915 GO:0005515
Aed6g2498 1247 Gene3D - 750 837 - -
Aed6g2498 1247 Gene3D Vaccinia Virus protein VP39 840 901 IPR029063 -
Aed6g2498 1247 Gene3D Peroxidase, domain 2 1084 1223 - -
Aed6g2498 1247 SMART kelc_smart 390 439 IPR006652 GO:0005515
Aed6g2498 1247 SMART kelc_smart 339 388 IPR006652 GO:0005515
Aed6g2498 1247 SMART kelc_smart 440 489 IPR006652 GO:0005515
Aed6g2498 1247 Gene3D - 1 205 IPR036602 -
Aed6g2498 1247 PANTHER PEROXIDASE 25-RELATED 1055 1243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2498 1247 PANTHER PEROXIDASE 25-RELATED 1001 1055 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g2498 1247 ProSiteProfiles Plant heme peroxidase family profile. 1052 1244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g2498 1247 Gene3D - 264 400 IPR015915 GO:0005515
Aed6g2498 1247 PANTHER PEROXIDASE 42 1055 1243 - -
Aed6g2498 1247 PANTHER PEROXIDASE 42 1001 1055 - -
Aed6g2498 1247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 766 913 IPR029063 -
Aed6g2498 1247 Gene3D - 1057 1244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2498 Aed-Chr6 26299344 26308613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2498 1057 1246 Peroxidase AT4G21960 84.211 2.47e-111 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2498 K15450 - gmx:100816336 1650.57