Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2463 ATGATGAACATGCTGCTTTCGGTGTCAGCGGCGAGTTTCAACACGGGATCACTGAGGATGGACCCGCTGGCCCGTTTCCGGCACCGCAATAACCAGGAAAAGGTTGTGGTAATCATGGGCGCCACGGGGACAGGAAAGTCAAAACTTGCCATAGACATTGCCACGCAATTCCCACCAGGCGAGATAGTCAACTCCGACAAAATGCAAGTGTATGAAGGCCTAGACATCACAACGAACAAAGTGAGCGAGGAAGAGCGTGGCGGGGTCCCACACCATCTCCTAGGCACGCTCAATCCTAACACCGATTTCAGTGCCCAAGACTTTTGCGACCACGCCACGCTCGCCGTTGGCTCCATCTTGGCTCGTCACGGTTTACCCATCATTGCGGGTGGGTCCAACTCCTTCCTCGACGCGTTGGTCAACCATCATCCCGACTTTTGCTTACGCTACCACTGCTGCTTCCTCTGGGTCGATGTTTCACTCCCCGTCCTCCATTCCTCCCTCTCTGCACGTGTGGATCGCATGATCCAAGCCGGCCAGGTCGACGAGGTTCGCCAAAGTTTTCAATACCACAACGACGACTATACCGTAGGGATACGAAAGGCCATTGGCGTCCCCGAGTTTCACAATTATTTCAAAGCCGAAGCCGATGACAAAGCCGATGAGAGGACCAAACAGCGGCTCCTCGAGGCTGCCATTGCTTCTCTCAAAATCAACAACTGCAGCCTCGCCAAACGACAGCTCCAGAAGATTCACCGCCTTTACAGCATGTGGAAATGGAATATGCACCGCCTCGACGCCACCGAGGTTTTTCTCAAGAGCACTCGCAAGGAAGCAGAGGAGGCGTGGGAGGATCACGTGTTATCCAAGAGCAGAAGGATTATCCATAAGTTCCTGTATGAGGATGCGCATGTTCCCGCAGGTATTGCGTCGTCGGCTGTTATTGCTTCTTCGCCGCAGGCCATGGCTGCCGCCGCCGCCGCAACTCACTAG 993 0.5458 MMNMLLSVSAASFNTGSLRMDPLARFRHRNNQEKVVVIMGATGTGKSKLAIDIATQFPPGEIVNSDKMQVYEGLDITTNKVSEEERGGVPHHLLGTLNPNTDFSAQDFCDHATLAVGSILARHGLPIIAGGSNSFLDALVNHHPDFCLRYHCCFLWVDVSLPVLHSSLSARVDRMIQAGQVDEVRQSFQYHNDDYTVGIRKAIGVPEFHNYFKAEADDKADERTKQRLLEAAIASLKINNCSLAKRQLQKIHRLYSMWKWNMHRLDATEVFLKSTRKEAEEAWEDHVLSKSRRIIHKFLYEDAHVPAGIASSAVIASSPQAMAAAAAATH 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2463 330 Pfam IPP transferase 69 143 - -
Aed6g2463 330 Pfam IPP transferase 149 249 - -
Aed6g2463 330 CDD NK 35 86 - -
Aed6g2463 330 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 304 - -
Aed6g2463 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 188 IPR027417 -
Aed6g2463 330 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 304 IPR039657 -
Aed6g2463 330 Gene3D - 33 299 IPR027417 -
Aed6g2463 330 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 161 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2463 Aed-Chr6 26051145 26052137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2463 149 299 C2H2 Transcription Factor Family AT2G27760 31.250 1.04e-16 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2463 6 26051145 26052137 Aed6g2463 6 26051145 26052137 ECH