Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2448 ATGCCGCCGCATGATCAGAGAAAAAAGTCATCTGTAGATATAGACTTCTTTACAGAATACGGTGAAGGGAGTAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACCGGAGAAAAAGTTGCAATAAAGAAAATCAATGACATATTTGAACACGTTTCTGATGCCACTCGCATTCTTCGTGAGATCAAGCTTCTTAGAATCTTACGCCATCCTGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTTATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTGCAGAGCATTATCAATTTTTTCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAATATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTCGGTCTTGCCAGAGTGGCTTTCAATGATACGCCAACTGCTATATTTTGGACTGATTACGTTGCAACAAGGTGGTATAGAGCTCCTGAATTGTGTGGATCCTTTTTCTCCAAGTATACCCCAGCTATAGACATATGGAGTATTGGCTGCATTTTTGCAGAACTTTTAACTGGGAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTTGGAATACCGTCTCCTGAAGCCATTGCTAGGGTACGGAATGAGAAAGCTCGGAGATACTTGAGTAGCATGCGTAAGAAGAAGCCGGTTTCTTTCTCCCAAAAGTTTCCTAATGTAGACCCCCTTGCTCTTCGTGTGTTAGAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGACGAGGCTCTAGCAGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAGCCTTCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGTAGGATAACAAAGGAAGATGTGCGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCGAAGATGTTAAAAGAACAACTAGAGGGAGCAGAGCCAACAGGATTTATGTATCCAAGTGCTGTGGACCAATTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGAAAAGGTGGAACTGTTGCTCCACCTGAGAGGCAACATGCATCATCATTGCCCAGGCCATGTGTTTTGTATTCAAATAACTCAAGACAAACTATGGCTGAGGTTGCAGATGATATCTCCAAGTGTAGCATCAAAGAAGTTGAGAGGCCAGCCATAGACAGGACTGGTGGTATCCCAATGACCAGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGTGTTGCTGCACGGCCCAGAAAAGTTGTAGGTTCAGTATTGCGTTACAACAACTGTGGGGTAGCACTAGCAGTGACAGCTGAGGCTGAGAAGAGGAGGATGGGTAGAACTCCGAGTGTTTCAGCCCAGTATGCTGCTCCAAGCAGTTCATATCAAAGACGAAACCCAAGCTGTAAAAGTGAGAGGGCAGAAGAGGGGGTTGAAGGTGCTAATGGACTTCAGACTAAGACTCAATACATAGCACGAAAAGTTGCTGCTGCTGCTGCTGTTCAAGGGGGACCTGGTGGTAATTGGTATTGA 1707 0.4265 MPPHDQRKKSSVDIDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRILRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTAEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGIPSPEAIARVRNEKARRYLSSMRKKKPVSFSQKFPNVDPLALRVLERMLAFEPKDRPTADEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEQLEGAEPTGFMYPSAVDQFKKQFAYLEEHYGKGGTVAPPERQHASSLPRPCVLYSNNSRQTMAEVADDISKCSIKEVERPAIDRTGGIPMTRLPLQAPQNIQGVAARPRKVVGSVLRYNNCGVALAVTAEAEKRRMGRTPSVSAQYAAPSSSYQRRNPSCKSERAEEGVEGANGLQTKTQYIARKVAAAAAVQGGPGGNWY 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2448 568 MobiDBLite consensus disorder prediction 502 539 - -
Aed6g2448 568 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 481 - -
Aed6g2448 568 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2448 568 Gene3D Phosphorylase Kinase; domain 1 41 362 - -
Aed6g2448 568 CDD STKc_TDY_MAPK 25 362 - -
Aed6g2448 568 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Aed6g2448 568 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2448 568 SUPERFAMILY Protein kinase-like (PK-like) 23 321 IPR011009 -
Aed6g2448 568 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 481 - -
Aed6g2448 568 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Aed6g2448 568 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g2448 568 MobiDBLite consensus disorder prediction 510 525 - -
Aed6g2448 568 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2448 Aed-Chr6 25983196 25989126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2448 5 568 MAP Kinase Gene Family AT5G19010 78.783 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aed6g2448 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2448 - K04371 gmx:100799442 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2448 6 25983196 25989126 Aed6g2448 6 25983196 25989126 ECH
Aed6g2448 6 25983196 25989126 Aed9g0631 9 4388057 4392398 PCT