Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2436 ATGGGTTGTGTCCATGGCAAGTGTTGCTGTGGCGACAGTTCTTTATCAGATGATGGTTCTAGGGATTACCGAGAACATGGCTTCATTCATGGCCACAGGAAGAACGTGCTCGCTCAGAGATCATTGAAGCATCTTCCTATTCCTTCCCACAACTTCATTTTGGAATACACTTTTCTCACTCAGCGGGGGTACTACCCTGACTCACCTGATAAAGAAAACCAAGATAGTTACTGCATTAGCACACAACTCCAAGGTAACCCCAATGTCCATTTCTTTGGTGTCTATGATGGGCATGGTCAATTTGGTACCCAGTGTTCCAATTTCGTTAAGGATAGGTTGGTAGAGAACTTGTCAAATGACCCTGCATTGTTGGTGGACCCTGTTCAAGCTTACAATTCTGCATTCTTGGCAACAAATCAAGAATTGCGTAGTACTAGTGAGATTGATGATTCTATGAGTGGCACCACTGCAATTACGGTGCTTGTTGTTGGGGACACTCTTTATGTTGCTAATGTTGGTGACTCTAGAGCGGTGCTGGCTGTTAAGGATGGGAATCACATTGTTGCTGAGGATTTGTCCTCTGATCAGACGCCATTTCGGAGAGATGAATATGAGAGAGTGAGACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCTAAAGGATCCGGATATCCAGAATTGGGGTGATGAAGAGAGTCGGGGTGGCGATCCTCCCAGATTGTGGGTTCCTAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTATAGGGGATAGTTTGGCGGAAACAATTGGTGTCGTTGCTACTCCAGAAGTGAAAACGGTTCAGCTTACTCCTAATCATCTTTTCTTTGTTGTGGCAAGCGATGGCATATTTGAATTCCTGACAAGCCAAACTGTTGTTGATATGGCAGCAAGCTATATGGATCCTCGTGATGCATGTGCAGCTATTGCAGAAAAGTCATATAAACTATGGTTGGAACTTGAGAACAGAACAGATGATATAACAATTATCATTGTTCAAATCAAAGGTTTCTCTAATTCAGGTACATCTGGAGTTAGATCAGATGAGATCGATGTTGGTACTGTAATGAATTCCAGGACAGACGCTCCTGAGATATCTGTTACCCCTGGATCTGATGTTTATCGTTCTGTCAGAACCAGTTTCTCTGAATTGCACTCCTTTCAGCATGTGGCTTCAGCGACGAGCACAGCCATAGAGGAGAGAGGCTATAGTGAAGCTTCACCAAGTCTCTTTGCAGTTTCTCCCAAGTGGTACATTTCCATGTTCCAACTTCCTGAGCATTTACTGTTGTTCATTTACTGGCCACTAAATTTTAGGCTGCCAACTTGCCTGTTTGAGAAACACCTCAGAGGAGAACACTTGTGCTCACTTTCCTGTGAAGCCATTGCACCTGATTTGATCTTTGGAAGGGAATCAATAACACGAGCTTGA 1467 0.4417 MGCVHGKCCCGDSSLSDDGSRDYREHGFIHGHRKNVLAQRSLKHLPIPSHNFILEYTFLTQRGYYPDSPDKENQDSYCISTQLQGNPNVHFFGVYDGHGQFGTQCSNFVKDRLVENLSNDPALLVDPVQAYNSAFLATNQELRSTSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVLAVKDGNHIVAEDLSSDQTPFRRDEYERVRLCGARVLSVDQVEGLKDPDIQNWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVVATPEVKTVQLTPNHLFFVVASDGIFEFLTSQTVVDMAASYMDPRDACAAIAEKSYKLWLELENRTDDITIIIVQIKGFSNSGTSGVRSDEIDVGTVMNSRTDAPEISVTPGSDVYRSVRTSFSELHSFQHVASATSTAIEERGYSEASPSLFAVSPKWYISMFQLPEHLLLFIYWPLNFRLPTCLFEKHLRGEHLCSLSCEAIAPDLIFGRESITRA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2436 488 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 34 401 - -
Aed6g2436 488 SMART PP2C_4 51 344 IPR001932 -
Aed6g2436 488 Gene3D - 54 348 IPR036457 -
Aed6g2436 488 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Aed6g2436 488 CDD PP2Cc 71 346 IPR001932 -
Aed6g2436 488 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 34 401 - -
Aed6g2436 488 MobiDBLite consensus disorder prediction 225 244 - -
Aed6g2436 488 ProSiteProfiles PPM-type phosphatase domain profile. 55 346 IPR001932 -
Aed6g2436 488 SUPERFAMILY PP2C-like 47 348 IPR036457 -
Aed6g2436 488 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2436 Aed-Chr6 25872703 25877063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2436 1 351 PP2C-type Phosphatase Gene Family AT3G06270 71.105 1.47e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2436 - - gmx:100797866 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2436 6 25872703 25877063 Aed6g2436 6 25872703 25877063 ECH