Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2426 ATGGCTTCCTCCTCCTCTCCTCCTCCTCTTCCTCCTCCGGGAGATCCACCCTCCGCCGTCCCCCTCTCCCTCCTCCCTCTCCCTCTCCCTCTCCCGGCCCCACCCTCCTCTCGGCGTCTCCCTCCCCCCTGCTGGTCCCCCGATGAAACCCTGGCCCTCATCGACGCCTACCGCGACAAATGGTACTCCCTCGGCCGCGGCAACCTCAAGGCCACCCACTGGCAAGAGGTTGCCGACTCCGTCTCATCCCGCTGCCCCAATGCCTCCCCTCCCAAAACCCCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAACGCGCCCGCTCCCTCCCCGTTTCCCGTTTCAACTCCTCCTGGCTCCACTTCAAGCTCATGGACTCCATGGAGAAAGGCCCCTCCCCTGTCAAACCCGAAAACAACGATTCTGATAACAGTGACAACGATAACGACGATGATGACGACGATCAAGATCTCTACCAGGAGATCAACCACAACGGCCACACCAGGAGCTTGAACAAGTTGTATAGGAATGGCTTTCCTGCTTCTGCTTCTGCTGGCTTTAGGATTCGAATTCCCACCGGCTTGGGCGCGCCGCAGCCTGGATCTGCCTCCAAGGTCTTTGGTAAGGTTGGAAATCAGAAATTCAGCCCCAATTTGAATCAAAACCCTAACCCTAGTTTTGGGAAGAAGAGGGAGAGAGATCCCGTGGGTGAAGTGGTGACTGCAATTAAGGTATTGGGAGATGGGTTTGTGAGAATGGAACAGATGAAGATGGAGATGGCCAGGGAGATTGAGACCATGCGGATGGAGATGGAAATGAAGCGGACTGAGATGATTCTAGAGTCCCAACAGCGGATTATTGAGGCATTTGCCAAGGCCGTTTCGGAAAAGAAGAAGAAGCCCAACAAGACTACTCATGTCTCCTCCTCGCCTCAACACCCTTAA 969 0.5624 MASSSSPPPLPPPGDPPSAVPLSLLPLPLPLPAPPSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADSVSSRCPNASPPKTPVQCRHKMEKLRKRYRTEIQRARSLPVSRFNSSWLHFKLMDSMEKGPSPVKPENNDSDNSDNDNDDDDDDQDLYQEINHNGHTRSLNKLYRNGFPASASAGFRIRIPTGLGAPQPGSASKVFGKVGNQKFSPNLNQNPNPSFGKKRERDPVGEVVTAIKVLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIIEAFAKAVSEKKKKPNKTTHVSSSPQHP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2426 322 SMART 118neu2 52 141 IPR006578 -
Aed6g2426 322 Coils Coil 98 118 - -
Aed6g2426 322 MobiDBLite consensus disorder prediction 1 42 - -
Aed6g2426 322 MobiDBLite consensus disorder prediction 136 167 - -
Aed6g2426 322 MobiDBLite consensus disorder prediction 301 322 - -
Aed6g2426 322 MobiDBLite consensus disorder prediction 1 43 - -
Aed6g2426 322 Gene3D - 45 110 - -
Aed6g2426 322 ProSiteProfiles Myb-like domain profile. 45 105 IPR001005 -
Aed6g2426 322 MobiDBLite consensus disorder prediction 152 166 - -
Aed6g2426 322 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 316 IPR044823 -
Aed6g2426 322 MobiDBLite consensus disorder prediction 217 234 - -
Aed6g2426 322 PANTHER TRANSCRIPTION FACTOR 4 316 - -
Aed6g2426 322 Pfam Myb/SANT-like DNA-binding domain 43 136 IPR044822 -
Aed6g2426 322 MobiDBLite consensus disorder prediction 208 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2426 Aed-Chr6 25813812 25814780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2426 2 136 Trihelix Transcription Factor Family AT3G14180 35.616 2.55e-20 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed6g2426 Myb_DNA-bind_4 2.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2426 - - vun:114179736 464.151