Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2418 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAGAAGATGGAAAACAAGAATTTTGTGGGAGCTCGTAAAATTGCTCTAAAGGCACAGCAACTGTACCCTGATCTGGAGAATATAGCTCAAATGCTTGTTGTTTGTGATGTGCACTGCTCTGCTGAGCAGAAATTGTTTGGTAATGAGATGGATTGGTATGAGATTCTTCAGGTCGAACAGACAGCTGTTGATGCAATAATTAGGAAGCAATATAGGAAGTTAGCTCTCCAACTTCATCCTGACAAAAACAACTTTGCTGGTGCAGAAGCTGCATTTAAGTTGATTGGGGAGGCTCAAAGAGTGCTTTTGGACAGAGAAAAACGTTTGCTTTTTGACATGAAGCGGAAAGTTCCAACACACAAACCTGCTACGTCACGTTTTAATTCTACAGTGAAGAACAATGTTAGAACCAACTTTACAAGCTCAAATGCTCAGCAGCAGCAGCAATCTAGGCAGCCAGCACAACAGCAACAAAATGGTGGCTGTTCTACTTTTTGGACAGTCTGCCCATTTTGTTCTGTTAGGTATCAATATTACAGAGAAATTTTAAATAAATCTCTTCGCTGTCAAAATTGCCAAAAGCCCTTTGTTGCATATGAAGTGAATATACAAGGTACATCATCACCAGCAACTAATTCAACTCAGCAAGCTTCTGACCAGCAGAAAGATGGTTTGAATCATGGTTCTTTCAAGGTGGGTGCTGGATCTCGAGGCAATTCACAGGCTGAGAAGTCCAATACAGGGCCTTGCGATAAAAAAGGACCTAGTAATGTCTCTGGAAACGCAAACGGAAAGAGGAAGAGGAAGCAGGTGGCAGAAGCCAGTGAAAGTCCTGATTCTATGAGCAGCAGTGATTCTGAAGAAGATATTGTTGGCAAGGATGGTTATTCTGGTGTAGAAAACCATTCAACTTCTAGAGAAGGGCATCCACGCAGATCTGCGCGTCAAAAGCGTCAAGTTTCCTACAAGGAGAATGTGAAAAACAATGGTGATAGCTTCCTGAAACCACGTGGCGATGGTGAAAGTCATGGTGAGACAACTAAAATGAATGATCAGAATGGTTTAGCTGCTGAACATAAAGAAGTAGAACAGAAGCAACACTTGTATTCTGAAAGAAATGAGGAATCTAAGACGGTTAGGGGAAAAGATGCAGTGGGAGGGTCAACGCAGATGGATGGAACTTCAGAGAATTCTCCAGATTCAATCTCCAAAACAGCAAATCATCCAAGTGTGTATGTATATCCTGAAGCAGAGTTCAGTGATTTTGACAAGGGCAAGAATATAGAATGTTTTGCTGCAGGACAGATATGGGCTGTTTATGATACAGCAGAAGGCTTGCCTAGATTCTATGCTTTAATCAAAAAAGTTCTGTCTCCCGGATTCAAGCTGCGGATAACATGGTTTGAATCATATCCGGATTGCAAGGAGGAAAGCAACTGGGTCAATGAGGAATTGCCTGTTGCCTGTGGGAAATTTAAACTTGGTGACACTGACATAATTGAAGATCGTCTAATTTTCTCTCATCTGGTTTTGTGTGAAAATATTAGCCGTAATATTTTTAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATTAAATGGTACATGGATGTGAAATCTCATCAGCTGTATGAATATGAGTTTGTTGAAATTTTGACAGACTATGTTGAAGATGAGGGTATATATGTTGCTTACATGACTAAGTTGAAAGGTTTTGTAAGTCTTTTCTTTCGAAATATTAATGAAGAAAACAAATCATTTCAAATTCCACTACTAGAATTGTTTAGATTCTCTCACAGGGTTCCATCTTTCAAAATGACGGGTCAGGAAGGAGTTGGTGTACCTACAGGATCTTATGAACTTGATCCTGGAGCTTTACCAGTGAATATTGAAGAGATTGCTGTTCCTGACAATTTGGATGTGAAGGTTGGTCATAGTTCACCTGGTGGTGAGAATACTAGGCCTTCAGATAGATCAGAACCCCTTGTGACATCACAGAGAGATGCATCTTTTCCCAAGGTTAATTTGGAAAGAAGCAATATGGCAAGAGCGAACATGGATTCTGTTGATGACAGTGATAATTGTTGTGCTCCTCCAGCATCGAGCTCTGAAACTATTGAAATTCCCGATACTCAATTCTTCAATTTTGATGCAGGGAGGGCACTTGAAAAGTTTCAGATTGGTCAGATTTGGGCATTTTACAGTGATGAGGATGGATTGCCAAAATATTACGGTCAGATAAAAAAGATTGTGACAAACCCAGATCTTGAATTGCATGTTTACTGGCTTACTTGCTGCTGGCTACCAGAGAATACCATTAGATGGGAAGACAAAGATAGTCTTATTTCCTGTGGCAGATTTAAAGTTATCAAGACAGATGAATTTCTCAGTGTCTATAGTACCACCTCTTCTGTTTCACATCAAGTGCATGCTGATGCTGTTGGTAAGAATAAGAATTATGCCATCTTTCCGAGGAAAGGTGAAGTTTGGGCTTTATATAGAAAATGGACAAATAAAATGAAATGTTCTGAGATGAAAAATTGTGAGTATGACATAGTTGAAGTTGTTGAAGAAACTGAGCTGTTCATAAGTGTTGTAGTATTGGAGTTTGTTAGTGGGTATACTTCAGTTTTCAGGGGCAAATCAAATGAAGGATCATCTGTCAACCTAAGAATATCCAGAAAAGAGTTGCTTAAGTTCTCCCACCAAATCCCAGCTTTCAAACTGACAGAAGAGCATGGCAATCTGAAAGACTTCTGGGAACTTGATCCAGGTGCACTACCAATGCATTATTATGGCTTGAAATGA 2874 0.3987 MDCNKEEALRAKDIAEKKMENKNFVGARKIALKAQQLYPDLENIAQMLVVCDVHCSAEQKLFGNEMDWYEILQVEQTAVDAIIRKQYRKLALQLHPDKNNFAGAEAAFKLIGEAQRVLLDREKRLLFDMKRKVPTHKPATSRFNSTVKNNVRTNFTSSNAQQQQQSRQPAQQQQNGGCSTFWTVCPFCSVRYQYYREILNKSLRCQNCQKPFVAYEVNIQGTSSPATNSTQQASDQQKDGLNHGSFKVGAGSRGNSQAEKSNTGPCDKKGPSNVSGNANGKRKRKQVAEASESPDSMSSSDSEEDIVGKDGYSGVENHSTSREGHPRRSARQKRQVSYKENVKNNGDSFLKPRGDGESHGETTKMNDQNGLAAEHKEVEQKQHLYSERNEESKTVRGKDAVGGSTQMDGTSENSPDSISKTANHPSVYVYPEAEFSDFDKGKNIECFAAGQIWAVYDTAEGLPRFYALIKKVLSPGFKLRITWFESYPDCKEESNWVNEELPVACGKFKLGDTDIIEDRLIFSHLVLCENISRNIFKVYPRKGETWALFKNWDIKWYMDVKSHQLYEYEFVEILTDYVEDEGIYVAYMTKLKGFVSLFFRNINEENKSFQIPLLELFRFSHRVPSFKMTGQEGVGVPTGSYELDPGALPVNIEEIAVPDNLDVKVGHSSPGGENTRPSDRSEPLVTSQRDASFPKVNLERSNMARANMDSVDDSDNCCAPPASSSETIEIPDTQFFNFDAGRALEKFQIGQIWAFYSDEDGLPKYYGQIKKIVTNPDLELHVYWLTCCWLPENTIRWEDKDSLISCGRFKVIKTDEFLSVYSTTSSVSHQVHADAVGKNKNYAIFPRKGEVWALYRKWTNKMKCSEMKNCEYDIVEVVEETELFISVVVLEFVSGYTSVFRGKSNEGSSVNLRISRKELLKFSHQIPAFKLTEEHGNLKDFWELDPGALPMHYYGLK 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2418 957 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 955 - -
Aed6g2418 957 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Aed6g2418 957 MobiDBLite consensus disorder prediction 249 280 - -
Aed6g2418 957 PANTHER - 1 955 - -
Aed6g2418 957 MobiDBLite consensus disorder prediction 663 689 - -
Aed6g2418 957 MobiDBLite consensus disorder prediction 222 241 - -
Aed6g2418 957 MobiDBLite consensus disorder prediction 222 423 - -
Aed6g2418 957 PRINTS DnaJ domain signature 87 102 IPR001623 -
Aed6g2418 957 PRINTS DnaJ domain signature 103 123 IPR001623 -
Aed6g2418 957 PRINTS DnaJ domain signature 69 87 IPR001623 -
Aed6g2418 957 Pfam DnaJ domain 67 128 IPR001623 -
Aed6g2418 957 Pfam Domain of unknown function (DUF3444) 725 934 IPR024593 -
Aed6g2418 957 Pfam Domain of unknown function (DUF3444) 427 632 IPR024593 -
Aed6g2418 957 CDD DnaJ 67 120 IPR001623 -
Aed6g2418 957 MobiDBLite consensus disorder prediction 671 689 - -
Aed6g2418 957 Gene3D DnaJ domain 64 177 IPR036869 -
Aed6g2418 957 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Aed6g2418 957 MobiDBLite consensus disorder prediction 370 397 - -
Aed6g2418 957 SMART dnaj_3 66 123 IPR001623 -
Aed6g2418 957 MobiDBLite consensus disorder prediction 404 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2418 Aed-Chr6 25770365 25774481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2418 4 217 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.616 2.19e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2418 - - gmx:100795200 1701.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2418 6 25770365 25774481 Aed6g2418 6 25770365 25774481 ECH