Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2380 ATGGAGGATTCAATTGGGCAAAAATGGAAGCAGCGAGAGTTCGCTTTGGCATCAGTTTCCGACCTCTCTTCAGCTCCTTCTTCCGCTTCGCCGGGAATTGCTCGCTTCGACTCTGATGGTCTCCAAATTCATCAGCAATCTCAGCAGATTCCATTCAATGTTGATCCTCGAACTGTTCAGTTATTCAAATTGAGTCCTGTTCAATCGGTTTGCACGGTGGAAGGATCCGATGATGGTAAAAAGACATCGTATTCCAGGGGAGTCACAATCCAGTTTAGAAATGAGGAAGAGAGTGCAGCCTTCCATTGTGTAGTCCAACAGTGGAAGAAGGAAGCCAATGCTCAAGAAGGAAATGGACGAAATGGAACTATTACAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCATCATCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGCGGACAGGGACCTATCATGCTGCTGTTCTTGAGAACCGTGCTGATTTCATTGGTCGTGTTGTAGTTGACGTGGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCCCGGAAACTTATAGCTGGAAACCCAATGTTGGCTCAACGCATTACAGTGATCAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGAACCTTGTTAGTCAATGAAAGAATGCTGGAGTCTTATGTCATTGCTAGAGATAGGTTTCTCGTTCCTACTGGGAAAATGTTTCCAGCTGTTGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATTGAAATGGCTAATAAGGCCCTGTTCTGGCAGCAGCAAAACTATTATGGTGTTGATTTAACACCTCTACATGGGACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGACCCAAGATTGTTAATAGCTCCTTCAATGTCCCATGTGATAGACTTCTCCAAAATAAAGGAGGAAGAACTGTATGAAATTGATATTCCTCTGAGATTCATAGCCTCTGTGGGCACCAGAGTGCATGGGTTGGCATGTTGGTTTGATGTGCTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGGGCACCGACAACCCATTGGTACCAGTTACGCTGTGTTCTCTCTCAGCCAATTTATGTCGTGGCAGGACAAGAAATTACTGGCAGACTTCACTTGATTGCCCACAATGCACAGAGTTACACAATATACTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGAATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCTTACTATAGAATGTCTCAACCGCAAGCTTATGCATTAGCTCAAGACCAGCAACCTCAACCACTTGTACAGACACAGGAACAGGATATACATATTCAATCTCAGGATTTGGACGAAGCGGAAATAGTGCAACAGGCTTCGGCTAATCCTAATTCATGTGCTCAGATTGATTCACTGATGCACAATGTTTAA 1620 0.4296 MEDSIGQKWKQREFALASVSDLSSAPSSASPGIARFDSDGLQIHQQSQQIPFNVDPRTVQLFKLSPVQSVCTVEGSDDGKKTSYSRGVTIQFRNEEESAAFHCVVQQWKKEANAQEGNGRNGTITTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYHAAVLENRADFIGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPMLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLVPTGKMFPAVGRIHMAPFTDEYLFIEMANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSMSHVIDFSKIKEEELYEIDIPLRFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGAPTTHWYQLRCVLSQPIYVVAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQPQPLVQTQEQDIHIQSQDLDEAEIVQQASANPNSCAQIDSLMHNV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2380 539 CDD AdoMet_MTases 182 282 - -
Aed6g2380 539 Gene3D Vaccinia Virus protein VP39 121 283 IPR029063 -
Aed6g2380 539 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Aed6g2380 539 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 491 IPR025799 GO:0016274|GO:0018216
Aed6g2380 539 Gene3D - 285 493 - -
Aed6g2380 539 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 491 - -
Aed6g2380 539 Pfam Ribosomal protein L11 methyltransferase (PrmA) 179 252 - -
Aed6g2380 539 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2380 Aed-Chr6 25493979 25503708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2380 71 432 C2H2 Transcription Factor Family AT3G12270 31.579 3.78e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2380 K05931 - gmx:100780736 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2380 6 25493979 25503708 Aed6g2380 6 25493979 25503708 ECH
Aed6g2380 6 25493979 25503708 Aed4g0715 4 5991478 5999577 PCT