Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2376 ATGGAGGAGCCCCAGTACCGCGAACACCCCAAAGCCAAAATCGCCACCATTCCGCCGTCGCAGCACTCCGACGGCGCCGCCGCCGAGTTGCGCGGTGTCGATTGCAACCTCGCTTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCCGGTTCCTTCTCCGATATCGTCGTCAATGCCATGGGTTCCACTTATCACCTCCATCGTCTTATCCTTTCTCGCAGTTCGTATTTCAGGAACATGCTTCATGGGCCTTGGAAAGAAGCCAGTGCTCCTGTTGTGACTCTTCATGTTGATGATAAGAATGTTAATGATGAGGCAATTGCAATGGCTTTGGCATATCTATACGGACACCACCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCTTCTGCTTCCTTTCTTGACCTGCAGGATTTATGTGGAATTTGTACGGATTTCATTATATCTGAACTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCTGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGCTGGGGCTACCTCTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAGCTTTCATCTCAAACATTACATGCATTGCTGACTTCTAATGATCTGTGGATACCAAATGAAGAGAAGCGGTTTGATTTGGCTTTGCACACATTCCTGGCAAAAAATGCTCATTGTAAAGTAGAACATCCTGCGCATGGAATTTCTGGTTCCGAGTCTGCAACCGGTATTGATGCTGATTCTGGTAGCACCAAGGGAAAAAGTGTAACTGATAGCTGCACTAGTAAGAGGTTGGAAACTGACACGGGGAAAATGAGTCTTAAAAATGATCTAAAGGACCCTAGCACTCCTAGTCTTCTAGTTGAGCTTGCAGATCCAGTGGCCAACTTCAACAATGGGGTTTCTATTTCCAATGAACAGGTTCAACAAGCTTCATATGTCAGTTCACCAAACCTGAATCCAGGATATTCTTGTGACATGGAAGGACCATCGTTGGGTAATTCATTGCCTGATACAGACGGGATTAGGACATCATGTTATGTTGAGATGCCTCTTGGTGCTGGAGCGGCTGGTATGGGAGCCACTGGAGTGGGTATTGAAGGGCCATCTGAAGAAGGACCTTGCTACCATTTAGAGAACAATAGTTGGTTAGTTACGGATCAATCAAGACATTGCTTTTCATCGAATTCTTGTAATGAGCTCCCATCCAGTGACTGGGGAAGATATGGAACACCTTTATTTTCATGGAATGGCCAGGTGGTTGGCAGAAGACAGCTTAAAGCTCACTCCAGAGGAAACTACAGAGGCCATGGAGATGAATATGATGCATTTTCCATTATATTTGAAGGGGGGTCCCTTTTATATTGCAATATGTCTTTTGATGCACTTCTAAATGTGAGAAAGCAACTTGAAGAATCAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCTGCTGATACATGCAAAGTTTGTTCCCTCATGAGTATGGCTTGCACTTGTCAGAAGCAATTTGCATTTTCACATGGAGCTTCTACAACTGGATCTTATGTGCAAGAACATAATCAGAACATTATGCCCAGCAATGTGGGAAACATATATGTTGCTGAATCTTCTGCAGGCGAAAGAAATGGCCTCTTTAGACCTGTACGGGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTACATTTGTTCCAGCATCTGCTTCACCTCCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACAGAAACTATCCTCAGTCTGCAGCCAATGATGATTCAGAGACACGCACTGACCCCAATGGAGACCTGTCTGGAGATGGGTTGACAGCTTTAGTCGGGCTAAGCCTGGGAGGGAGTAATGGAACAAATGTACATACAGAGCTAACACAAAGGGGATATGAAATGGGCTTGCAAAGCAGCATGTCTGGAACTACTTCTGGAGGTGCAAGTACTGGTGGCATTCCCATGCAGATGTTAGAGACACCAGAACATACTATTGGTATAGAATGGGACAATGTCAACAGTACTTCTATATCACTGGATCTGAAAACTCCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGTGTACGTTTTGAGGATGTGCACAGGCTTGGTGATGGCCAGGTCAAGCACTCTCCAGAAGTTTTTTATGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCCCCAGGGACGGCGAACCCTTGGGTTGTTTCTTCACCGTCGAAAGGCAGAGATAACTGATATACATAGAAAGGTGCATATGTATGTTGACTCGCGTGAAAAGGTGACTGCACGCTACCAGTTGACTGTCCCATCCAAGAGGGAAATGATGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCCCCTAAGGGATGGGGATGGCGAACTGCTCTGCTATTCGATGAGCTCGCTGATCTTCTCCAAAACGGTGCCCTAAGGGTCATTGCTGTAGTGCAGCTTGTTTAA 2607 0.4542 MEEPQYREHPKAKIATIPPSQHSDGAAAELRGVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLASASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPNEEKRFDLALHTFLAKNAHCKVEHPAHGISGSESATGIDADSGSTKGKSVTDSCTSKRLETDTGKMSLKNDLKDPSTPSLLVELADPVANFNNGVSISNEQVQQASYVSSPNLNPGYSCDMEGPSLGNSLPDTDGIRTSCYVEMPLGAGAAGMGATGVGIEGPSEEGPCYHLENNSWLVTDQSRHCFSSNSCNELPSSDWGRYGTPLFSWNGQVVGRRQLKAHSRGNYRGHGDEYDAFSIIFEGGSLLYCNMSFDALLNVRKQLEESGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMSMACTCQKQFAFSHGASTTGSYVQEHNQNIMPSNVGNIYVAESSAGERNGLFRPVRVHVRGAIDGLAGIGRGTTFVPASASPPTRFVFSRVPFGVGNRNYPQSAANDDSETRTDPNGDLSGDGLTALVGLSLGGSNGTNVHTELTQRGYEMGLQSSMSGTTSGGASTGGIPMQMLETPEHTIGIEWDNVNSTSISLDLKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLTVPSKREMMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2376 868 Pfam BTB/POZ domain 49 153 IPR000210 GO:0005515
Aed6g2376 868 Gene3D Potassium Channel Kv1.1; Chain A 29 188 IPR011333 -
Aed6g2376 868 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 8 868 - -
Aed6g2376 868 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 8 868 - -
Aed6g2376 868 MobiDBLite consensus disorder prediction 272 288 - -
Aed6g2376 868 ProSiteProfiles BTB domain profile. 55 125 IPR000210 GO:0005515
Aed6g2376 868 MobiDBLite consensus disorder prediction 620 641 - -
Aed6g2376 868 SMART BTB_4 55 155 IPR000210 GO:0005515
Aed6g2376 868 SUPERFAMILY POZ domain 49 153 IPR011333 -
Aed6g2376 868 MobiDBLite consensus disorder prediction 254 271 - -
Aed6g2376 868 MobiDBLite consensus disorder prediction 250 293 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed6g2376 BTB 3.6e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2376 - - gmx:100806711 1672.52