Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2361 ATGACGACTGGATTCGACAAGGCTCAAGCGAATAAGAAGAAGCTGGCCATTCTGAGCGTGTCTTCCATCCTCCTGGTGGCGATGGTTGCCGCGGTGGCCGTGGGCATAAACGGCGGCGCCGAGATAGAGGAAGAAGGCGGTGAGATCACAAAAACTCAAAAGAACGACCATGTGATATGCGAGTCGACCGAATACAAAGATACATGCCGCAAGAGTCTGGCAGCCTCAAACGGAACCACCGACTTGAAATCTATGATCATAACCGCGTTCAACGCCACGGCCGATGAGCTCCAGAACAAGATCAAAAACTCCACTCTCTACCACGAACTTGTCACCGACAACATGACCAAACAGGCCATGGAAATTTGCCAGGAAGTCCTTGGTTATGCTGTGGATGGCATTCACCATTCCGTTAACACGATCGACGAGTTTGACCTACACAAGTTGAACGATTACGCCTATGATCTCAAGGTTTGGATCGCTGGAACTCTCGCTCACCAGCACACATGTCTGGATGGGTTCGAGAACACCACCACCGACGCCGGCAAGACCATGGCCAAGGTTCTGAACACGTCTTTGGAGCTAAGCAGCAACGCCTTGGACATCGTGAACGGTATGTCGAGTCTGATCAAGGGTCTTAACTTTAGTTCCTTCATGACCACAAGCAACAGGAGGCTTCTCTCTGACGATGAGGATGAGGATGAGGATGGGGATGGGATCCCAACGTGGGTGAGTGAAGGACATAGGAGAGTTCTTGAGGGTGCGGACCCCAAGCCCGACGTGGTTGTGGCTCAGGACGGATCTGGAATGGTTAAGACAATCCACGAGGCTCTTAAACTTGTGCCTAAAAAGAACCACAAGCCTTTTGTCATTTACATCAAGGCCGGTATCTACCAGGAGTATCTTATCTTGAACAAGCACATGACCCATGTCACCATGATCGGAGATGGCCCCACCAAGACCAGAATCACCGGCAACAAAAACTACGTGGATGGAGTCCAGACTTACAACACCGCAACAGTGGGTGTAAACGCTGCTAACTTCATGGCCAAGAACATTGGGTTCGAGAACACTGCGGGAGCAGAGAAGCACCAAGCCGTGGCACTGAGGGTGACAGCGGACAAGGCCGTGTTCTACAACTGCAACATGGACGGGTACCAGGACACATTGTACACGCAATCACAGCGTCAGTTTTACCGAGACTGCACCGTGTCGGGCACAATCGACTTCGTGTTTGGTGACGCGGTGGCGGTGTTCCAGAACTGCAAGTTGGTGGTGAGGAAGCCGATGGAGAACCAGCAATGCATGGTGACAGCAGGAGGAAGGTCGAAGGTGGACAGCCCAAGCGCATTAGTTTTCCAGAGCTGCGTGTTCACGGGAGAACCCGACGTGCTTGCCTTGAATCCGAAGATATCTTTCTTGGGAAGGCCATGGAGGGTTTACGCCAAGGTTGTGTTCATGGACTCGCAAATGGATGACATATTTTTGCCAGAAGGGTACATGCCATGGATGGGAAATGCTTTCAAGGAGACAAGCACATACTACGAGTTCAACAACAGGGGTCCTGGTGCCAACACTGCTGGAAGAATCACCTGGCCTGGTTTCAAGGTTATTGACGCTGCTGAGGCTGCTCAATACTACCCTGGCAAGTTCTTTGAGATCGCTAATACTACTGACCGTGATTCTTGGATTGTTGACTCTGGGGTGCCCTACACCTTTGGCCCACTCGCAGCTTAA 1737 0.5153 MTTGFDKAQANKKKLAILSVSSILLVAMVAAVAVGINGGAEIEEEGGEITKTQKNDHVICESTEYKDTCRKSLAASNGTTDLKSMIITAFNATADELQNKIKNSTLYHELVTDNMTKQAMEICQEVLGYAVDGIHHSVNTIDEFDLHKLNDYAYDLKVWIAGTLAHQHTCLDGFENTTTDAGKTMAKVLNTSLELSSNALDIVNGMSSLIKGLNFSSFMTTSNRRLLSDDEDEDEDGDGIPTWVSEGHRRVLEGADPKPDVVVAQDGSGMVKTIHEALKLVPKKNHKPFVIYIKAGIYQEYLILNKHMTHVTMIGDGPTKTRITGNKNYVDGVQTYNTATVGVNAANFMAKNIGFENTAGAEKHQAVALRVTADKAVFYNCNMDGYQDTLYTQSQRQFYRDCTVSGTIDFVFGDAVAVFQNCKLVVRKPMENQQCMVTAGGRSKVDSPSALVFQSCVFTGEPDVLALNPKISFLGRPWRVYAKVVFMDSQMDDIFLPEGYMPWMGNAFKETSTYYEFNNRGPGANTAGRITWPGFKVIDAAEAAQYYPGKFFEIANTTDRDSWIVDSGVPYTFGPLAA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2361 578 Pfam Plant invertase/pectin methylesterase inhibitor 59 202 IPR006501 GO:0004857
Aed6g2361 578 PANTHER PECTINESTERASE 8 576 - -
Aed6g2361 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 207 IPR035513 -
Aed6g2361 578 TIGRFAM PME_inhib: pectinesterase inhibitor domain 57 206 IPR006501 GO:0004857
Aed6g2361 578 ProSitePatterns Pectinesterase signature 2. 404 413 IPR033131 -
Aed6g2361 578 CDD PMEI-like_3 59 208 - -
Aed6g2361 578 SMART PMEI_2 51 202 IPR006501 GO:0004857
Aed6g2361 578 Pfam Pectinesterase 260 552 IPR000070 GO:0030599|GO:0042545
Aed6g2361 578 PANTHER PECTINESTERASE 8 576 - -
Aed6g2361 578 ProSitePatterns Pectinesterase signature 1. 285 304 IPR018040 -
Aed6g2361 578 Gene3D - 258 576 IPR012334 -
Aed6g2361 578 SUPERFAMILY Pectin lyase-like 257 570 IPR011050 -
Aed6g2361 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 207 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2361 Aed-Chr6 25374223 25375959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2361 1 577 Carbohydrate Esterase AT3G05610 43.857 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2361 K01051 - gmx:100820068 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2361 6 25374223 25375959 Aed6g2361 6 25374223 25375959 ECH
Aed6g2361 6 25374223 25375959 Aed4g0690 4 5814243 5817478 PCT