Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2354 ATGGGGAGAATGGGACAAGAATCAGACTCCAAGACCAAGTTGGTATTAGAGATTTGCTCCATTTCCACGCGTTCTGTGCTGTGTGTTCATCATACACTTCTCTCTAAACCAAAAAAGGCAACTTTCGTTGACTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTGAATGCCATTCGCAAACGCTACCATAAACTGGCCTTACAAGTTCACCCAGATAAGAATAAACATCCCAAGGCTGAAATTGCTTTCAAGCTCGTTTCTGAGGCATGTGCATGTCTATCTAATGCAGCAAAGAGAAAAGCCTTTGACTTGGAGAGATGTAAGCATTTCTGCTTCGAGTGCAAAAGAATACCGTATACATCGAGCAATGTCCCTGGAAATTCTTCAAGTGGATCAGGTTTCAAGGCATGGAATATCATCACCAGATCAAGATCTTTTAGACTTTGGAGAAATATCAGGGACATGAGAGAAAGATTCATGGACGAAGCTAAGGTGATAGAGAACTGTTTGCGAACAAACTCAATGTCAAGGAAGGAATCTCCACTCCACAATCCGAAAGGCTTTCTACATAGAAGCAAGTCACTGCATAGATTCGACAAAGAAACCCCAGTTTTCAATCCATCGGACTACTTGCACCAGGGCTACCCTCATCTGAGGAGCAATATTTACAAGAATTCTTCAACATTTTGGTATTTGCAGAGAAGTACTATGATTCACAGTGATAAGGGAGGAGGAACGTTGCACGCCTCCCCTGTTTTTGAGGTCAAATCAACAAGTTTGTTTTCTAGCAAATTCGCTTTTGTCCCATCAAAAAGTTAG 825 0.4194 MGRMGQESDSKTKLVLEICSISTRSVLCVHHTLLSKPKKATFVDWYCILGVEENAGVNAIRKRYHKLALQVHPDKNKHPKAEIAFKLVSEACACLSNAAKRKAFDLERCKHFCFECKRIPYTSSNVPGNSSSGSGFKAWNIITRSRSFRLWRNIRDMRERFMDEAKVIENCLRTNSMSRKESPLHNPKGFLHRSKSLHRFDKETPVFNPSDYLHQGYPHLRSNIYKNSSTFWYLQRSTMIHSDKGGGTLHASPVFEVKSTSLFSSKFAFVPSKS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2354 274 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 260 - -
Aed6g2354 274 SMART dnaj_3 43 100 IPR001623 -
Aed6g2354 274 PANTHER BNAC03G44070D PROTEIN 6 260 - -
Aed6g2354 274 ProSiteProfiles dnaJ domain profile. 44 108 IPR001623 -
Aed6g2354 274 Gene3D DnaJ domain 43 167 IPR036869 -
Aed6g2354 274 PRINTS DnaJ domain signature 64 79 IPR001623 -
Aed6g2354 274 PRINTS DnaJ domain signature 46 64 IPR001623 -
Aed6g2354 274 PRINTS DnaJ domain signature 80 100 IPR001623 -
Aed6g2354 274 SUPERFAMILY Chaperone J-domain 35 107 IPR036869 -
Aed6g2354 274 CDD DnaJ 44 91 IPR001623 -
Aed6g2354 274 Pfam DnaJ domain 44 105 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2354 Aed-Chr6 25342991 25345459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2354 11 105 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.294 8.98e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2354 - - gmx:100801809 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2354 6 25342991 25345459 Aed6g2354 6 25342991 25345459 ECH
Aed6g2354 6 25342991 25345459 Aed4g0675 4 5660591 5662377 PCT