Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2344 ATGCTCCTCCGAACCCACTGTTGCTACCTCGCCGCGCTAGCAATCCTCCTCTCAACTACGTCGTTTGCCGACGGCCAATCCTGCAATGGCATCCTCGTCTCCTACGCCTACACCGGCGGCGTGCGGCTGCCTCCGAACGTCTCCGACGCCGCGAAGCAGCCGTACCGGTTCGAGTCGACGGTGACTGTGCTCAACAACGGCCTCGACGAGCTCAAGTCCTGGAAGGTCTTCGTTGGGTTCGACCACGACGAGTTGTTGGTCTCTGCCTCCAATGCTGTGCTCGCCGACGGCACCACCCTCCCCGCCGCCGTCGGAAACGGCACCGTCCTCGCCGGCTTCCCCATGACCGATCTCAAGACCGCCGTCGAAACTGCCGGCGACTTGACCCAGATGCAGTCTCAGATCGAGCTCGTTGGCACCGTCTTCGGGGTGGCGCCGCCTAGTGTTCCAATGCCGAAGTCCATCAACCTCGCCAATGATGGATTCCTCTGTCGCAAATCCACCGCTCAAGGGAAGAATGCGAGTAGTGTGTGTTGCACGAGAGATCCCAAGTTCAAGACTAACATTACTACTGATGAAGAGTTTCTGCCACGACAGAGTGGTGATCTTACCATTATGTATGATGTGGTCAGAACCTATGATTCCAATTACTGGGCTGACGTTACTATTGCAAACCATAACCCACTTGGGAGGCTTGACAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATTCTCAATGAAAGGGGCTTATCCTTCTGTTGTGGATGCTTCTGATTGTCTCTTTGGTAAGCAAGGAACTTTCTACAAGGATCTTGACTTTGCCAATGTGTTGAATTGTGAGAGAAGGCCAACCATAATTGATCTTCCTCTCACCAAGTTCAATGATTCCGACCTTGGGAAGATTCCATTTTGTTGCCGGAATGGTACTATTTTGCCACCATCCATGGATCCTAGCATGTCAGCTTCGAGATTCCAAATGCAGGTCTTCAAGATGCCGCCAGCGCTTAACCGATCCCAGCTTTTGCCACCACAGAACTGGCAAATAAGTGGTGCACTCAACCCTGACTATAAATGTGGACCTCCTGTTAGAGTGAGTCCTACTGAAAATCCTGATCCATCCGGCTTACCATCAAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATAACAACAGCCAAGGGATCATCAAGTAAATGCTGTGTCTCTTTTTCAGCCTATTACAATGATTCAGTTATTCCATGCAAAACATGTGCATGTGGATGCCCCAAGAACACAGAGAGAACATGTAGTACTACTGCTCCAGCTATGTGGCTTCCACCAGAGGCACTTCTTGTTCCTTTTGAGAACCGAACATCCAAGGCTGTTGCTTGGGCAAGTCTGAAACATCTCCGGGTGCCAAACCCAATGCCATGTAGTGATTACTGTGGTGTGAGCATCAACTGGCATTTGTACACAGACTACAATAAAGGATGGAGTGCAAGGGTGACACTTTTTAACTGGGGTGATACTAATTTTGCAGACTGGTTTACCGCTGTACAAATGGACAAAGCAGCTGCAGGTTTTGAGAAGATGTATTCATTCAATGCAACTCTTCTAGATGGTGTAAACAATACAATAATTATGCAAGGTTTGCCAGGATTGAACTACCTTGTTGCAGAAACAGATGGAGCTGACCCTCTGAGAGATCCTAGGGTGCCTGGTAAACAACAGTCAGTGATCTCATTCACAAAGAAAACTACTCCTGGAATCAATGTAGCTCTTGGAGATGGGTTTCCCACTAAGGTATTTTTCAATGGGGAAGAATGCTCTCTTCCTTCGGTGCTTCCAACCAACAGTGGTTTCAGGAATGGTTTTTCATTGTCTACTTCCTTGCTTCTAACACTGGTGCTGATGATCCTCTTGATGCGGTAA 1929 0.4894 MLLRTHCCYLAALAILLSTTSFADGQSCNGILVSYAYTGGVRLPPNVSDAAKQPYRFESTVTVLNNGLDELKSWKVFVGFDHDELLVSASNAVLADGTTLPAAVGNGTVLAGFPMTDLKTAVETAGDLTQMQSQIELVGTVFGVAPPSVPMPKSINLANDGFLCRKSTAQGKNASSVCCTRDPKFKTNITTDEEFLPRQSGDLTIMYDVVRTYDSNYWADVTIANHNPLGRLDNWRLSWDWMNDEFIFSMKGAYPSVVDASDCLFGKQGTFYKDLDFANVLNCERRPTIIDLPLTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVFKMPPALNRSQLLPPQNWQISGALNPDYKCGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKGSSSKCCVSFSAYYNDSVIPCKTCACGCPKNTERTCSTTAPAMWLPPEALLVPFENRTSKAVAWASLKHLRVPNPMPCSDYCGVSINWHLYTDYNKGWSARVTLFNWGDTNFADWFTAVQMDKAAAGFEKMYSFNATLLDGVNNTIIMQGLPGLNYLVAETDGADPLRDPRVPGKQQSVISFTKKTTPGINVALGDGFPTKVFFNGEECSLPSVLPTNSGFRNGFSLSTSLLLTLVLMILLMR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2344 642 Pfam COBRA-like protein 217 396 IPR006918 GO:0010215|GO:0031225
Aed6g2344 642 PANTHER COBRA-LIKE PROTEIN 7 15 642 - -
Aed6g2344 642 PANTHER COBRA-LIKE PROTEIN 7 15 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2344 Aed-Chr6 25286486 25289634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2344 28 618 COBRA Gene Family AT4G16120 69.529 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2344 - - gmx:100814396 1234.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2344 6 25286486 25289634 Aed6g2344 6 25286486 25289634 ECH
Aed6g2344 6 25286486 25289634 Aed4g0662 4 5597458 5600230 PCT