Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2339 ATGAAGCTATTTGGTGAGGATATAAACATAGCAATAGCAATACCATGTAAGGATGGAAGAAAGAAATTGAAGTGCCGATACTGTCGTCGGGAGTTTGTTAATTCTCAAGCACTAGGAGGCCATCAAAATGCACACAGGAAAGAACGTGCTAAGCTAGCCCACTTCAAACATCACTATCAGCAACATAGCTCCTCGGGATCTTCTAATTCTGTTCATCATCCAAGCATTAATATTAGTACTGCAGCTTTGATTCAATTTCATAGTGCAGGCTGCTCATCACATCTTGGGTCGTCGACAGCGACTGGCAATCATCATCATCATCTGGATCTCAACCTCACACTAGCTTGCTCCTCCTCAGACAACTTTAACAAATGA 375 0.4213 MKLFGEDINIAIAIPCKDGRKKLKCRYCRREFVNSQALGGHQNAHRKERAKLAHFKHHYQQHSSSGSSNSVHHPSINISTAALIQFHSAGCSSHLGSSTATGNHHHHLDLNLTLACSSSDNFNK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2339 124 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Aed6g2339 124 PANTHER ZINC FINGER PROTEIN 5 1 116 IPR044299 GO:0010090
Aed6g2339 124 PANTHER ZINC FINGER PROTEIN 8-LIKE 1 116 - -
Aed6g2339 124 Gene3D Classic Zinc Finger 6 77 - -
Aed6g2339 124 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Aed6g2339 124 SUPERFAMILY beta-beta-alpha zinc fingers 19 50 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2339 Aed-Chr6 25251814 25252188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2339 20 52 C2H2 Transcription Factor Family AT1G68360 69.697 2.31e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2339 - - gmx:102670392 104.375