Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2332 ATGGCGAATAACTTAGCGGCGCAACTGGTTGGTTCAGAGACACATGGATTCCACACATTGCAAGATTTGGATGTGGGGAGCATTATGGAGGAAGCAAGAATCAGATGGCTCCGTCCCAATGAGATTCATGCCATGCTTTGTAATTACAAGTATTTTACCATTAATGTCAAGCCAGTGAATTTGCCAAAAAGTGGTACTATCGTCTTATTTGATCGCAAGATGCTTAGGAACTTTCGAAAGGACGGGCACAACTGGAAAAAGAAAAAGGATGGGAAAACCGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAACGAAGAAAGGATCCATGTATATTATGCACATGGCCAGGATAACCCAAATTTTGTCCGAAGATGTTATTGGCTGCTTGATAAGAGTATGGAACACATAGTCCTTGTTCATTACCGTGAAATACAGGAGATGCAAGGTTCTCCCGTCACTCCTGTAAATTCACACTCCAGTTCTGTCTCTGATCCTCCTGCACCATGGATTTTATCAGAAGAAATAAATTCAGGAACCACAACTGCATATGCTGGTGGCATGAGTGACGGTATAAATGTCAAAAGTCATGAACTGAGACTTCATGAGATTAATACACTTGAATGGGATGACCTAGTGGATGCACATGATCATGATCATAACGCCTCTACCATGCCTAATGGAGGCACTGTTCCATATTTTGATCAACAAGGTCAAATTGTATTAAATGGCAGTTTCAGCAATGTAGCCAACAATCTATCTGCAGAAATTCCCTCTTTTGATAGTCTTACTCAGCCAATTGCTGGGAGCAGCAGCGTTCCTTACAATTTTTCAGAAAAAGTTAATCCTCAGACGATGGACAATCATGCAAATCCAAGTGAGCAGAGGAATAATACTGTTTCTTTAAGTGGTGTTGATTCCTTGGATACTTTGGTCAATGATAGATTGCAGAGTCAGGACAGCTTTGGATTGTGGGTGAACCACATCATGTCTGATTCAGCATGTTCAGTAGATGACCCAGCTCTTGAATCACCAGTTTCATCCGTTCATGAGCCATATTCGTCTCAGGTAGCGGATAGTCATCAATCTTCTCTGCCAGAACAAGTCCTGGTTACTGGATTTTTTCATAAGGACTATATGCACCTTTCAAAGTCCAATCTATTATGTGTCTGTGGTGATGTTAGTGTTCCTGCAGAAATTGTTCAGGTTGGGGTCTACCGGTGCTGGGTATTACTGCATTCTCCAGGATTCGTGAATCTATACTTGAGCTTTGATGGCCATAAGCCTATTAGCCAAGTTGTTAATTTTGAATATCGTACTCCTGTTTTGCATGATCCTGCAATTTCAATGGAAGAGAATGACAATTGGGATGAGTTTCGATTACAAATGAGGCTTGCTTATTTGCTCTTCGCTAAACAATTGAGCCTTGATGCTATCTCCAGTAAAGTATCACCAAATAGACTTAAAGAGGCTAGGCAATTCGCCCTCAAAACATCATTTATTTCCAATAGTTGGCAATACTTAATCAAGTCAACTGAAGACAACCAAATTCCATTTTCACAAGCAAAAGATGCCCTATTCGGAATTGCATTGAAAAACAGACTAAAGGAATGGCTTTTGGAAAGAATTGTTTTAGGCTGCAAGACTACTGAATATGATGCTCATGGCCAAAGTGTAATCCATTTGTGTGCAATTTTGGGATACACTTGGGCTGTTTCCTTATTTTCATGGTCAGGCTTGTCACTTGATTTCCGTGATAGGTTTGGATGGACAGCTCTTCATTGGGCAGCATACTGTGGAAGGGAGAAAATGGTTGCAACTCTGTTGTCTGCTGGGGCAAAGCCAAATTTGGTCACTGATCCTACTCCACAAAATCCTGGTGGATGCACTGCTGCTGATCTTGCTTATATGAGGGGTCATGATGGCTTGGCAGCTTATCTTTCAGAAAAATCTCTGGTTCAGCACTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCTCGCTGGAGACTAGCACGACTGATCCAGCAAATTCTGCAAACCTTACTGAGGACCAGCAGAACCTGAAGGATACGTTGGCAGCTTACCGAACCGCTGCTGAGGCAGCTTCCCGCATACATGCTGCATTTAGAGAACACTCTCTAAAACTGAGAACTAAGGCGGTTGCATCTTCCAATCCAGAGGCTGAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAACATGCCTTTAGGAACCACGAGACAAAGAAAATGATGGCAGCTGCTGCTCGCATTCAGTGTACATACCGTACATGGAAGATTCGTAAAGAATTTCTCAACTTGCGTCGTCAGGCTGTTAAAATTCAATCTGCGTTCCGGTGCTTTCAAGAGCGGAAGCATTATCGCAAAATTCTTTGGTCTGTTGGTGTGGTTGAGAAAGCAGTGTTGCGTTGGCGGTTGAAGAGAAGGGGCTTCCGTGGGCTCCAGGTCAAAACTTCTGAAGCGGGAACCAGAGATCAGGAACAGCAAAGTTATGCAGAGGAGGAATTCTTTCGGACTGGTAGGAAACAAGCTGAAGAACGTGTTGAGAGATCTGTAGTACGTGTGCAGGCTATGTTCCGCTCAAAGAAAGCACAAGAAGAGTACAGGAGGATGAAACTGGCACTTAATCAAGCAAAGTTGGAACGGGAATATGAACAACTTCTTAGTACTGAAGTTGACATGGAACTGAAGACAGATTACCCAAAAAGATTCTAA 2739 0.4253 MANNLAAQLVGSETHGFHTLQDLDVGSIMEEARIRWLRPNEIHAMLCNYKYFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPNFVRRCYWLLDKSMEHIVLVHYREIQEMQGSPVTPVNSHSSSVSDPPAPWILSEEINSGTTTAYAGGMSDGINVKSHELRLHEINTLEWDDLVDAHDHDHNASTMPNGGTVPYFDQQGQIVLNGSFSNVANNLSAEIPSFDSLTQPIAGSSSVPYNFSEKVNPQTMDNHANPSEQRNNTVSLSGVDSLDTLVNDRLQSQDSFGLWVNHIMSDSACSVDDPALESPVSSVHEPYSSQVADSHQSSLPEQVLVTGFFHKDYMHLSKSNLLCVCGDVSVPAEIVQVGVYRCWVLLHSPGFVNLYLSFDGHKPISQVVNFEYRTPVLHDPAISMEENDNWDEFRLQMRLAYLLFAKQLSLDAISSKVSPNRLKEARQFALKTSFISNSWQYLIKSTEDNQIPFSQAKDALFGIALKNRLKEWLLERIVLGCKTTEYDAHGQSVIHLCAILGYTWAVSLFSWSGLSLDFRDRFGWTALHWAAYCGREKMVATLLSAGAKPNLVTDPTPQNPGGCTAADLAYMRGHDGLAAYLSEKSLVQHFNDMSLAGNISGSLETSTTDPANSANLTEDQQNLKDTLAAYRTAAEAASRIHAAFREHSLKLRTKAVASSNPEAEARKIVAAMKIQHAFRNHETKKMMAAAARIQCTYRTWKIRKEFLNLRRQAVKIQSAFRCFQERKHYRKILWSVGVVEKAVLRWRLKRRGFRGLQVKTSEAGTRDQEQQSYAEEEFFRTGRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLALNQAKLEREYEQLLSTEVDMELKTDYPKRF 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2332 912 ProSiteProfiles IQ motif profile. 752 781 IPR000048 GO:0005515
Aed6g2332 912 SMART iq_5 774 796 IPR000048 GO:0005515
Aed6g2332 912 SMART iq_5 751 773 IPR000048 GO:0005515
Aed6g2332 912 SMART iq_5 855 877 IPR000048 GO:0005515
Aed6g2332 912 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Aed6g2332 912 SMART ANK_2a 588 617 IPR002110 GO:0005515
Aed6g2332 912 SMART ANK_2a 627 656 IPR002110 GO:0005515
Aed6g2332 912 Pfam IQ calmodulin-binding motif 777 796 IPR000048 GO:0005515
Aed6g2332 912 Pfam IQ calmodulin-binding motif 754 772 IPR000048 GO:0005515
Aed6g2332 912 Gene3D - 517 658 IPR036770 -
Aed6g2332 912 ProSiteProfiles IQ motif profile. 857 885 IPR000048 GO:0005515
Aed6g2332 912 Coils Coil 869 898 - -
Aed6g2332 912 ProSiteProfiles Ankyrin repeat profile. 588 620 IPR002110 GO:0005515
Aed6g2332 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 730 802 IPR027417 -
Aed6g2332 912 SUPERFAMILY Ankyrin repeat 531 652 IPR036770 -
Aed6g2332 912 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 15 906 - -
Aed6g2332 912 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Aed6g2332 912 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 906 - -
Aed6g2332 912 Gene3D - 749 799 - -
Aed6g2332 912 ProSiteProfiles IQ motif profile. 775 799 IPR000048 GO:0005515
Aed6g2332 912 SUPERFAMILY E set domains 368 439 IPR014756 -
Aed6g2332 912 Gene3D Immunoglobulins 357 442 IPR013783 -
Aed6g2332 912 ProSiteProfiles Ankyrin repeat region circular profile. 588 616 - -
Aed6g2332 912 SMART CG_1_2 28 146 IPR005559 GO:0003677
Aed6g2332 912 Pfam Ankyrin repeats (3 copies) 537 617 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2332 Aed-Chr6 25201657 25209339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2332 28 889 CAMTA Transcription Factor Family AT3G16940 53.846 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Aed6g2332 CG-1 4.3e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2332 K21596 - gmx:100793970 1685.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2332 6 25201657 25209339 Aed6g2332 6 25201657 25209339 ECH
Aed6g2332 6 25201657 25209339 Aed4g0645 4 5483533 5492901 PCT